Graph-based clustering principles and RepeatExplorer pipeline are described in:
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6D6II42V
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/
RepeatExplorer was used to study repeats in a broad range of species:
2015
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ZRT35EW8
2015
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/
2014
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ZRT35EW8
2014
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/
2013
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ZRT35EW8
2013
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/
2012
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ZRT35EW8
2012
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/
2011
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ZRT35EW8
2011
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http://repeatexplorer.org/repeatexplorer/wp-content/plugins/zotpress/