| size | 24592 |
| size_real | 29841 |
| ecount | 20001523 |
| supercluster | 2 |
| annotations_summary | 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH 0.01% organelle/plastid 0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT 0.01% Class_I/LINE:LINE-RT 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH 0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT 0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RT 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT |
| pair_completeness | 0.451057622173596 |
| pbs_score | 0.2255728 |
| TR_score | 0.29645342465753405 |
| TR_monomer_length | 261.0 |
| loop_index | 0.71390068605031 |
| satellite_probability | 0.00799254842602608 |
| consensus | CACAAATGAACAATTCTTGGATGATACAAATGACAAAACCTCCTTTCTATATATAGGAGTCTAAGGGGTCACAATATAAT |
| TAREAN_annotation | Putative satellite (low confidence) |
| orientation_score | 1 |
protein domains:
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CL17 ----> CL133
No. of shared pairs: :2508
CL17 ----> CL111
No. of shared pairs: :1716
CL17 ----> CL88
No. of shared pairs: :146
CL17 ----> CL62
No. of shared pairs: :94
CL17 ----> CL2
No. of shared pairs: :50
CL17 ----> CL7
No. of shared pairs: :48
CL17 ----> CL20
No. of shared pairs: :47
CL17 ----> CL21
No. of shared pairs: :46
CL17 ----> CL75
No. of shared pairs: :42
CL17 ----> CL37
No. of shared pairs: :37
CL17 ----> CL3
No. of shared pairs: :35
CL17 ----> CL16
No. of shared pairs: :34
CL17 ----> CL19
No. of shared pairs: :33
CL17 ----> CL4
No. of shared pairs: :32
CL17 ----> CL24
No. of shared pairs: :32
CL17 ----> CL45
No. of shared pairs: :32
CL17 ----> CL47
No. of shared pairs: :31
CL17 ----> CL6
No. of shared pairs: :30
CL17 ----> CL44
No. of shared pairs: :30
CL17 ----> CL11
No. of shared pairs: :29
CL17 ----> CL140
No. of shared pairs: :29
CL17 ----> CL71
No. of shared pairs: :28
CL17 ----> CL115
No. of shared pairs: :27
CL17 ----> CL12
No. of shared pairs: :26
CL17 ----> CL66
No. of shared pairs: :26
CL17 ----> CL14
No. of shared pairs: :25
CL17 ----> CL38
No. of shared pairs: :25
CL17 ----> CL9
No. of shared pairs: :24
CL17 ----> CL18
No. of shared pairs: :24
CL17 ----> CL48
No. of shared pairs: :24
CL17 ----> CL123
No. of shared pairs: :24
CL17 ----> CL94
No. of shared pairs: :23
CL17 ----> CL139
No. of shared pairs: :23
CL17 ----> CL151
No. of shared pairs: :23
CL17 ----> CL13
No. of shared pairs: :22
CL17 ----> CL23
No. of shared pairs: :22
CL17 ----> CL26
No. of shared pairs: :22
CL17 ----> CL49
No. of shared pairs: :22
CL17 ----> CL81
No. of shared pairs: :22
CL17 ----> CL130
No. of shared pairs: :22
CL17 ----> CL1
No. of shared pairs: :21
CL17 ----> CL34
No. of shared pairs: :20
CL17 ----> CL40
No. of shared pairs: :20
CL17 ----> CL43
No. of shared pairs: :20
CL17 ----> CL63
No. of shared pairs: :20
CL17 ----> CL89
No. of shared pairs: :20
CL17 ----> CL145
No. of shared pairs: :20
CL17 ----> CL10
No. of shared pairs: :19
CL17 ----> CL28
No. of shared pairs: :19
CL17 ----> CL61
No. of shared pairs: :19
CL17 ----> CL90
No. of shared pairs: :19
CL17 ----> CL150
No. of shared pairs: :19
CL17 ----> CL36
No. of shared pairs: :18
CL17 ----> CL54
No. of shared pairs: :18
CL17 ----> CL100
No. of shared pairs: :18
CL17 ----> CL25
No. of shared pairs: :17
CL17 ----> CL29
No. of shared pairs: :17
CL17 ----> CL31
No. of shared pairs: :17
CL17 ----> CL86
No. of shared pairs: :17
CL17 ----> CL87
No. of shared pairs: :17
CL17 ----> CL148
No. of shared pairs: :17
CL17 ----> CL22
No. of shared pairs: :16
CL17 ----> CL30
No. of shared pairs: :16
CL17 ----> CL76
No. of shared pairs: :16
CL17 ----> CL104
No. of shared pairs: :16
CL17 ----> CL153
No. of shared pairs: :16
CL17 ----> CL42
No. of shared pairs: :15
CL17 ----> CL95
No. of shared pairs: :15
CL17 ----> CL103
No. of shared pairs: :15
CL17 ----> CL172
No. of shared pairs: :15
CL17 ----> CL15
No. of shared pairs: :14
CL17 ----> CL32
No. of shared pairs: :14
CL17 ----> CL116
No. of shared pairs: :14
CL17 ----> CL162
No. of shared pairs: :14
CL17 ----> CL186
No. of shared pairs: :14
CL17 ----> CL5
No. of shared pairs: :13
CL17 ----> CL78
No. of shared pairs: :13
CL17 ----> CL84
No. of shared pairs: :13
CL17 ----> CL91
No. of shared pairs: :13
CL17 ----> CL97
No. of shared pairs: :13
CL17 ----> CL108
No. of shared pairs: :13
CL17 ----> CL161
No. of shared pairs: :13
CL17 ----> CL27
No. of shared pairs: :12
CL17 ----> CL35
No. of shared pairs: :12
CL17 ----> CL50
No. of shared pairs: :12
CL17 ----> CL51
No. of shared pairs: :12
CL17 ----> CL80
No. of shared pairs: :12
CL17 ----> CL105
No. of shared pairs: :12
CL17 ----> CL138
No. of shared pairs: :12
CL17 ----> CL170
No. of shared pairs: :12
CL17 ----> CL941
No. of shared pairs: :12
CL17 ----> CL74
No. of shared pairs: :11
CL17 ----> CL85
No. of shared pairs: :11
CL17 ----> CL98
No. of shared pairs: :11
CL17 ----> CL109
No. of shared pairs: :11
CL17 ----> CL113
No. of shared pairs: :11
CL17 ----> CL117
No. of shared pairs: :11
CL17 ----> CL120
No. of shared pairs: :11
CL17 ----> CL132
No. of shared pairs: :11
CL17 ----> CL134
No. of shared pairs: :11
CL17 ----> CL147
No. of shared pairs: :11
CL17 ----> CL167
No. of shared pairs: :11
CL17 ----> CL181
No. of shared pairs: :11
CL17 ----> CL195
No. of shared pairs: :11
CL17 ----> CL197
No. of shared pairs: :11
CL17 ----> CL58
No. of shared pairs: :10
CL17 ----> CL59
No. of shared pairs: :10
CL17 ----> CL65
No. of shared pairs: :10
CL17 ----> CL106
No. of shared pairs: :10
CL17 ----> CL126
No. of shared pairs: :10
CL17 ----> CL141
No. of shared pairs: :10
CL17 ----> CL152
No. of shared pairs: :10
CL17 ----> CL156
No. of shared pairs: :10