Cluster no. 35
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Cluster is part of supercluster: 1
Cluster characteristics:
| size |
24858 |
| size_real |
24858 |
| ecount |
16880963 |
| supercluster |
1 |
| annotations_summary |
|
| pair_completeness |
0.596736896197328 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0434467776973208 |
| satellite_probability |
2.61809967943218e-19 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
| 31 |
199000 |
| 55 |
169000 |
| 67 |
17500 |
| 117 |
6060 |
| 154 |
715 |
| 156 |
518 |
| 229 |
9 |
| 9 |
1 |
| 14 |
1 |
| 17 |
1 |
| 53 |
1 |
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 55 |
2540 |
0.374 |
| 31 |
2420 |
0.3 |
| 156 |
218 |
0.0551 |
| 117 |
93 |
0.0217 |
| 53 |
69 |
0.0116 |
| 229 |
58 |
0.0155 |
| 67 |
23 |
0.0044 |
| 102 |
15 |
0.00277 |
| 14 |
12 |
0.00188 |
| 17 |
12 |
0.00137 |
| 74 |
11 |
0.00242 |
| 6 |
9 |
0.00132 |
| 43 |
9 |
0.00159 |
| 4 |
8 |
0.00124 |
| 19 |
8 |
0.00161 |
| 23 |
8 |
0.00148 |
| 41 |
8 |
0.00133 |
| 3 |
7 |
0.00105 |
| 79 |
6 |
0.00109 |
| 130 |
6 |
0.00117 |
| 197 |
6 |
0.00149 |
| 524 |
6 |
0.00188 |
| 9 |
5 |
0.000878 |
| 13 |
5 |
0.0011 |
| 15 |
5 |
0.00092 |
| 22 |
5 |
0.000866 |
| 33 |
5 |
0.00113 |
| 38 |
5 |
0.00116 |
| 89 |
5 |
0.00113 |
| 98 |
5 |
0.00125 |
| 24 |
4 |
0.000654 |
| 27 |
4 |
0.000906 |
| 28 |
4 |
0.000886 |
| 30 |
4 |
0.000601 |
| 34 |
4 |
0.000736 |
| 59 |
4 |
0.000954 |
| 81 |
4 |
0.000752 |
| 97 |
4 |
0.000859 |
| 137 |
4 |
0.000986 |
| 2 |
3 |
0.000349 |
| 5 |
3 |
0.000644 |
| 18 |
3 |
0.000612 |
| 25 |
3 |
0.000611 |
| 46 |
3 |
0.000644 |
| 49 |
3 |
0.000628 |
| 51 |
3 |
0.000506 |
| 66 |
3 |
0.000511 |
| 69 |
3 |
0.000721 |
| 70 |
3 |
0.000756 |
| 72 |
3 |
0.000687 |
| 75 |
3 |
0.000496 |
| 83 |
3 |
0.000699 |
| 85 |
3 |
0.000677 |
| 88 |
3 |
0.000557 |
| 101 |
3 |
0.00065 |
| 108 |
3 |
0.000765 |
| 118 |
3 |
0.000765 |
| 127 |
3 |
0.000697 |
| 134 |
3 |
0.000688 |
| 168 |
3 |
0.000703 |
| 182 |
3 |
0.000767 |
| 221 |
3 |
0.000889 |
| 1 |
2 |
0.000305 |
| 7 |
2 |
0.000265 |
| 12 |
2 |
0.000282 |
| 16 |
2 |
0.000357 |
| 29 |
2 |
0.000409 |
| 37 |
2 |
0.000325 |
| 39 |
2 |
0.000441 |
| 40 |
2 |
0.000303 |
| 42 |
2 |
0.00041 |
| 44 |
2 |
0.00033 |
| 45 |
2 |
0.000349 |
| 50 |
2 |
0.000424 |
| 52 |
2 |
0.000407 |
| 58 |
2 |
0.000507 |
| 71 |
2 |
0.000375 |
| 77 |
2 |
0.000459 |
| 78 |
2 |
0.000358 |
| 82 |
2 |
0.000489 |
| 84 |
2 |
0.00043 |
| 92 |
2 |
0.000536 |
| 93 |
2 |
0.000514 |
| 96 |
2 |
0.000487 |
| 100 |
2 |
0.000494 |
| 109 |
2 |
0.000524 |
| 120 |
2 |
0.000455 |
| 126 |
2 |
0.000471 |
| 132 |
2 |
0.000517 |
| 135 |
2 |
0.00049 |
| 151 |
2 |
0.000499 |
| 157 |
2 |
0.000513 |
| 161 |
2 |
0.000452 |
| 163 |
2 |
0.000455 |
| 166 |
2 |
0.000526 |
| 170 |
2 |
0.000477 |
| 189 |
2 |
0.00049 |
| 194 |
2 |
0.000603 |
| 208 |
2 |
0.000566 |
| 213 |
2 |
0.000475 |
| 245 |
2 |
0.000535 |
| 6450 |
2 |
0.000636 |
| 26300 |
2 |
0.000637 |
| 117000 |
2 |
0.000637 |
| 190000 |
2 |
0.000637 |
| 8 |
1 |
0.000214 |
| 20 |
1 |
0.000154 |
| 21 |
1 |
0.000185 |
| 54 |
1 |
0.000244 |
| 57 |
1 |
0.000242 |
| 63 |
1 |
0.000165 |
| 64 |
1 |
0.00025 |
| 68 |
1 |
0.00022 |
| 73 |
1 |
0.000253 |
| 80 |
1 |
0.000225 |
| 86 |
1 |
0.000181 |
| 91 |
1 |
0.000264 |
| 95 |
1 |
0.000246 |
| 99 |
1 |
0.000263 |
| 104 |
1 |
0.000254 |
| 106 |
1 |
0.000222 |
| 107 |
1 |
0.000262 |
| 110 |
1 |
0.000251 |
| 114 |
1 |
0.000266 |
| 115 |
1 |
0.000206 |
| 116 |
1 |
0.000194 |
| 119 |
1 |
0.000273 |
| 121 |
1 |
0.000275 |
| 122 |
1 |
0.000231 |
| 123 |
1 |
0.000241 |
| 125 |
1 |
0.000258 |
| 129 |
1 |
0.000269 |
| 133 |
1 |
0.000171 |
| 138 |
1 |
0.00026 |
| 139 |
1 |
0.000237 |
| 140 |
1 |
0.000199 |
| 141 |
1 |
0.00023 |
| 142 |
1 |
0.000254 |
| 144 |
1 |
0.000275 |
| 145 |
1 |
0.000221 |
| 148 |
1 |
0.00024 |
| 149 |
1 |
0.000263 |
| 152 |
1 |
0.000206 |
| 154 |
1 |
0.000272 |
| 159 |
1 |
0.000255 |
| 160 |
1 |
0.000252 |
| 164 |
1 |
0.000299 |
| 169 |
1 |
0.000259 |
| 173 |
1 |
0.000276 |
| 174 |
1 |
0.000239 |
| 176 |
1 |
0.000276 |
| 177 |
1 |
0.00028 |
| 178 |
1 |
0.000278 |
| 180 |
1 |
0.000283 |
| 184 |
1 |
0.000283 |
| 185 |
1 |
0.000255 |
| 186 |
1 |
0.000228 |
| 191 |
1 |
0.000246 |
| 193 |
1 |
0.000279 |
| 195 |
1 |
0.000286 |
| 233 |
1 |
0.000304 |
| 234 |
1 |
0.000303 |
| 237 |
1 |
0.00029 |
| 238 |
1 |
0.000292 |
| 241 |
1 |
0.000293 |
| 248 |
1 |
0.000299 |
| 250 |
1 |
0.000304 |
| 260 |
1 |
3e-04 |
| 261 |
1 |
0.000314 |
| 262 |
1 |
0.000313 |
| 263 |
1 |
0.000276 |
| 279 |
1 |
0.000296 |
| 283 |
1 |
0.000308 |
| 289 |
1 |
0.000309 |
| 305 |
1 |
0.000314 |
| 340 |
1 |
0.000313 |
| 351 |
1 |
0.000306 |
| 389 |
1 |
0.000311 |
| 399 |
1 |
0.000316 |
| 464 |
1 |
0.000315 |
| 485 |
1 |
0.000315 |
| 511 |
1 |
0.000315 |
| 546 |
1 |
0.000315 |
| 752 |
1 |
0.000316 |
| 902 |
1 |
0.000318 |
| 994 |
1 |
0.000316 |
| 1110 |
1 |
0.000317 |
| 1170 |
1 |
0.000318 |
| 1370 |
1 |
0.000318 |
| 1430 |
1 |
0.000318 |
| 1530 |
1 |
0.000317 |
| 1550 |
1 |
0.000317 |
| 1670 |
1 |
0.000317 |
| 1840 |
1 |
0.000318 |
| 2150 |
1 |
0.000317 |
| 2160 |
1 |
0.000318 |
| 3420 |
1 |
0.000318 |
| 4260 |
1 |
0.000318 |
| 4920 |
1 |
0.000318 |
| 6460 |
1 |
0.000318 |
| 6520 |
1 |
0.000318 |
| 6730 |
1 |
0.000318 |
| 6820 |
1 |
0.000318 |
| 7740 |
1 |
0.000318 |
| 11000 |
1 |
0.000318 |
| 15300 |
1 |
0.000318 |
| 16800 |
1 |
0.000318 |
| 17200 |
1 |
0.000318 |
| 19400 |
1 |
0.000318 |
| 19800 |
1 |
0.000318 |
| 28300 |
1 |
0.000318 |
| 30000 |
1 |
0.000318 |
| 34000 |
1 |
0.000318 |
| 36200 |
1 |
0.000318 |
| 38400 |
1 |
0.000318 |
| 39100 |
1 |
0.000318 |
| 39500 |
1 |
0.000318 |
| 39900 |
1 |
0.000318 |
| 49900 |
1 |
0.000318 |
| 50000 |
1 |
0.000318 |
| 51000 |
1 |
0.000318 |
| 54100 |
1 |
0.000319 |
| 55200 |
1 |
0.000318 |
| 55600 |
1 |
0.000318 |
| 56100 |
1 |
0.000318 |
| 58900 |
1 |
0.000319 |
| 61900 |
1 |
0.000319 |
| 65100 |
1 |
0.000318 |
| 68000 |
1 |
0.000318 |
| 70000 |
1 |
0.000318 |
| 74800 |
1 |
0.000319 |
| 75800 |
1 |
0.000318 |
| 77800 |
1 |
0.000319 |
| 80200 |
1 |
0.000319 |
| 81300 |
1 |
0.000319 |
| 84300 |
1 |
0.000318 |
| 87200 |
1 |
0.000318 |
| 89300 |
1 |
0.000318 |
| 90800 |
1 |
0.000318 |
| 91300 |
1 |
0.000318 |
| 93100 |
1 |
0.000318 |
| 93800 |
1 |
0.000318 |
| 96300 |
1 |
0.000318 |
| 135000 |
1 |
0.000318 |
| 152000 |
1 |
0.000318 |
| 157000 |
1 |
0.000318 |
| 179000 |
1 |
0.000318 |
| 181000 |
1 |
0.000318 |
| 198000 |
1 |
0.000318 |
| 201000 |
1 |
0.000318 |
| 208000 |
1 |
0.000318 |
| 211000 |
1 |
0.000318 |
| 235000 |
1 |
0.000318 |
| 246000 |
1 |
0.000318 |
| 253000 |
1 |
0.000318 |
| 255000 |
1 |
0.000318 |
| 256000 |
1 |
0.000318 |
| 259000 |
1 |
0.000318 |
| 269000 |
1 |
0.000318 |
| 282000 |
1 |
0.000318 |
| 290000 |
1 |
0.000318 |
| 292000 |
1 |
0.000318 |
| 296000 |
1 |
0.000318 |
| 3e+05 |
1 |
0.000318 |
| 309000 |
1 |
0.000318 |
| 318000 |
1 |
0.000318 |
| 323000 |
1 |
0.000318 |
| 329000 |
1 |
0.000318 |
| 346000 |
1 |
0.000318 |
| 350000 |
1 |
0.000318 |
|
CL35 ----> CL55
No. of shared pairs: :2535
CL35 ----> CL31
No. of shared pairs: :2415
CL35 ----> CL156
No. of shared pairs: :218
CL35 ----> CL117
No. of shared pairs: :93
CL35 ----> CL53
No. of shared pairs: :69
CL35 ----> CL229
No. of shared pairs: :58
CL35 ----> CL67
No. of shared pairs: :23
CL35 ----> CL102
No. of shared pairs: :15
CL35 ----> CL14
No. of shared pairs: :12
CL35 ----> CL17
No. of shared pairs: :12
CL35 ----> CL74
No. of shared pairs: :11