Cluster no. 41
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Cluster is part of supercluster: 1
Cluster characteristics:
| size |
22975 |
| size_real |
22975 |
| ecount |
7876487 |
| supercluster |
1 |
| annotations_summary |
|
| pair_completeness |
0.598705726810939 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0699020674646355 |
| satellite_probability |
1.08314087355855e-17 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
| 31 |
124000 |
| 102 |
71100 |
| 4 |
48800 |
| 182 |
47900 |
| 156 |
1 |
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 31 |
2250 |
0.289 |
| 102 |
1900 |
0.369 |
| 182 |
559 |
0.153 |
| 4 |
135 |
0.0217 |
| 1 |
17 |
0.00269 |
| 12 |
12 |
0.00175 |
| 5 |
11 |
0.0025 |
| 6 |
11 |
0.00167 |
| 53 |
11 |
0.00194 |
| 25 |
10 |
0.00215 |
| 3 |
9 |
0.0014 |
| 37 |
9 |
0.00152 |
| 52 |
9 |
0.00193 |
| 35 |
8 |
0.00133 |
| 9 |
7 |
0.00129 |
| 16 |
7 |
0.00131 |
| 18 |
7 |
0.00151 |
| 24 |
7 |
0.00119 |
| 32 |
7 |
0.00162 |
| 74 |
7 |
0.00163 |
| 11 |
6 |
0.000947 |
| 13 |
6 |
0.0014 |
| 15 |
6 |
0.00116 |
| 34 |
6 |
0.00116 |
| 47 |
6 |
0.00113 |
| 72 |
6 |
0.00146 |
| 10 |
5 |
0.00119 |
| 17 |
5 |
0.000586 |
| 19 |
5 |
0.00106 |
| 20 |
5 |
0.000803 |
| 23 |
5 |
0.00097 |
| 30 |
5 |
0.000781 |
| 42 |
5 |
0.00108 |
| 55 |
5 |
0.000766 |
| 59 |
5 |
0.00127 |
| 77 |
5 |
0.00122 |
| 79 |
5 |
0.000957 |
| 80 |
5 |
0.00119 |
| 134 |
5 |
0.00122 |
| 7 |
4 |
0.000548 |
| 26 |
4 |
0.000818 |
| 36 |
4 |
0.000913 |
| 46 |
4 |
0.000909 |
| 48 |
4 |
0.000663 |
| 57 |
4 |
0.00103 |
| 60 |
4 |
0.00102 |
| 62 |
4 |
0.000729 |
| 63 |
4 |
0.000691 |
| 83 |
4 |
0.000991 |
| 88 |
4 |
0.000779 |
| 101 |
4 |
0.000917 |
| 107 |
4 |
0.00112 |
| 120 |
4 |
0.000965 |
| 124 |
4 |
0.00107 |
| 126 |
4 |
0.001 |
| 144 |
4 |
0.00118 |
| 146 |
4 |
0.00111 |
| 203 |
4 |
0.00117 |
| 8 |
3 |
0.000679 |
| 21 |
3 |
0.000584 |
| 22 |
3 |
0.000543 |
| 27 |
3 |
0.000721 |
| 28 |
3 |
0.000704 |
| 43 |
3 |
0.000555 |
| 45 |
3 |
0.000549 |
| 50 |
3 |
0.000672 |
| 65 |
3 |
0.000726 |
| 67 |
3 |
0.000603 |
| 70 |
3 |
0.000808 |
| 82 |
3 |
0.000782 |
| 85 |
3 |
0.000719 |
| 95 |
3 |
0.000787 |
| 96 |
3 |
0.000779 |
| 106 |
3 |
0.000706 |
| 108 |
3 |
0.000818 |
| 109 |
3 |
0.000843 |
| 115 |
3 |
0.000653 |
| 130 |
3 |
0.000615 |
| 151 |
3 |
8e-04 |
| 152 |
3 |
0.000653 |
| 157 |
3 |
0.000824 |
| 166 |
3 |
0.000846 |
| 175 |
3 |
0.000868 |
| 189 |
3 |
0.000783 |
| 2 |
2 |
0.00024 |
| 14 |
2 |
0.000326 |
| 38 |
2 |
0.000495 |
| 56 |
2 |
0.000644 |
| 68 |
2 |
0.000467 |
| 69 |
2 |
0.000512 |
| 71 |
2 |
0.000394 |
| 73 |
2 |
0.00054 |
| 75 |
2 |
0.000345 |
| 81 |
2 |
0.000395 |
| 86 |
2 |
0.000379 |
| 87 |
2 |
0.000481 |
| 90 |
2 |
0.000383 |
| 91 |
2 |
0.000566 |
| 92 |
2 |
0.000575 |
| 93 |
2 |
0.000551 |
| 94 |
2 |
0.000629 |
| 98 |
2 |
0.000534 |
| 99 |
2 |
0.000565 |
| 100 |
2 |
0.000527 |
| 103 |
2 |
0.000414 |
| 105 |
2 |
0.000465 |
| 119 |
2 |
0.000586 |
| 135 |
2 |
0.000523 |
| 142 |
2 |
0.000542 |
| 145 |
2 |
0.000469 |
| 149 |
2 |
0.000564 |
| 153 |
2 |
0.000481 |
| 156 |
2 |
0.00054 |
| 161 |
2 |
0.00048 |
| 168 |
2 |
0.000499 |
| 169 |
2 |
0.000556 |
| 172 |
2 |
0.000497 |
| 183 |
2 |
0.000549 |
| 184 |
2 |
0.000609 |
| 190 |
2 |
0.000551 |
| 197 |
2 |
0.000529 |
| 206 |
2 |
6e-04 |
| 213 |
2 |
0.000506 |
| 216 |
2 |
0.000635 |
| 218 |
2 |
0.000648 |
| 230 |
2 |
0.000658 |
| 236 |
2 |
0.000681 |
| 33 |
1 |
0.000241 |
| 39 |
1 |
0.000234 |
| 40 |
1 |
0.000157 |
| 44 |
1 |
0.000172 |
| 49 |
1 |
0.000221 |
| 51 |
1 |
0.000176 |
| 54 |
1 |
0.00026 |
| 58 |
1 |
0.000271 |
| 61 |
1 |
0.000224 |
| 64 |
1 |
0.000268 |
| 66 |
1 |
0.000178 |
| 76 |
1 |
0.000239 |
| 84 |
1 |
0.000228 |
| 89 |
1 |
0.00024 |
| 104 |
1 |
0.000271 |
| 110 |
1 |
0.000268 |
| 111 |
1 |
0.000186 |
| 113 |
1 |
0.000242 |
| 118 |
1 |
0.000273 |
| 121 |
1 |
0.000296 |
| 122 |
1 |
0.000246 |
| 123 |
1 |
0.000257 |
| 127 |
1 |
0.000247 |
| 129 |
1 |
0.000289 |
| 133 |
1 |
0.000179 |
| 138 |
1 |
0.000278 |
| 139 |
1 |
0.000253 |
| 140 |
1 |
0.000209 |
| 147 |
1 |
0.000183 |
| 154 |
1 |
0.000293 |
| 155 |
1 |
0.000278 |
| 158 |
1 |
0.000262 |
| 159 |
1 |
0.000273 |
| 160 |
1 |
0.000269 |
| 162 |
1 |
0.000248 |
| 163 |
1 |
0.000242 |
| 164 |
1 |
0.000323 |
| 165 |
1 |
0.000247 |
| 167 |
1 |
0.000238 |
| 173 |
1 |
0.000297 |
| 177 |
1 |
0.000302 |
| 179 |
1 |
0.000288 |
| 181 |
1 |
0.000276 |
| 186 |
1 |
0.000242 |
| 187 |
1 |
0.000286 |
| 188 |
1 |
0.000335 |
| 198 |
1 |
0.000304 |
| 199 |
1 |
0.000318 |
| 201 |
1 |
0.000335 |
| 207 |
1 |
0.000319 |
| 208 |
1 |
0.000305 |
| 209 |
1 |
0.000324 |
| 210 |
1 |
0.00033 |
| 211 |
1 |
0.000295 |
| 212 |
1 |
0.000311 |
| 220 |
1 |
0.000306 |
| 225 |
1 |
0.000324 |
| 229 |
1 |
0.000286 |
| 231 |
1 |
0.000326 |
| 232 |
1 |
0.000306 |
| 233 |
1 |
0.000329 |
| 239 |
1 |
0.000314 |
| 245 |
1 |
0.000287 |
| 256 |
1 |
0.000321 |
| 284 |
1 |
0.000327 |
| 288 |
1 |
0.00032 |
| 302 |
1 |
0.000335 |
| 307 |
1 |
0.000334 |
| 315 |
1 |
0.000339 |
| 325 |
1 |
0.000341 |
| 337 |
1 |
0.000341 |
| 339 |
1 |
0.000337 |
| 352 |
1 |
0.000329 |
| 353 |
1 |
0.00034 |
| 464 |
1 |
0.000342 |
| 487 |
1 |
0.000344 |
| 552 |
1 |
0.000343 |
| 586 |
1 |
0.000343 |
| 605 |
1 |
0.000345 |
| 707 |
1 |
0.000344 |
| 874 |
1 |
0.000345 |
| 1300 |
1 |
0.000345 |
| 1670 |
1 |
0.000345 |
| 3150 |
1 |
0.000346 |
| 3920 |
1 |
0.000346 |
| 4030 |
1 |
0.000346 |
| 4570 |
1 |
0.000346 |
| 5170 |
1 |
0.000346 |
| 5950 |
1 |
0.000346 |
| 6040 |
1 |
0.000346 |
| 6120 |
1 |
0.000346 |
| 6520 |
1 |
0.000346 |
| 6970 |
1 |
0.000346 |
| 7720 |
1 |
0.000346 |
| 9520 |
1 |
0.000346 |
| 10900 |
1 |
0.000346 |
| 11900 |
1 |
0.000347 |
| 13200 |
1 |
0.000347 |
| 13300 |
1 |
0.000346 |
| 13400 |
1 |
0.000347 |
| 13600 |
1 |
0.000347 |
| 15000 |
1 |
0.000347 |
| 18300 |
1 |
0.000346 |
| 20000 |
1 |
0.000347 |
| 21400 |
1 |
0.000347 |
| 23700 |
1 |
0.000347 |
| 25600 |
1 |
0.000347 |
| 26200 |
1 |
0.000347 |
| 27600 |
1 |
0.000347 |
| 27900 |
1 |
0.000347 |
| 28200 |
1 |
0.000347 |
| 29600 |
1 |
0.000347 |
| 32400 |
1 |
0.000347 |
| 33900 |
1 |
0.000347 |
| 34100 |
1 |
0.000347 |
| 37200 |
1 |
0.000347 |
| 37900 |
1 |
0.000347 |
| 38200 |
1 |
0.000347 |
| 38300 |
1 |
0.000347 |
| 42700 |
1 |
0.000347 |
| 45500 |
1 |
0.000347 |
| 47200 |
1 |
0.000347 |
| 48200 |
1 |
0.000347 |
| 66100 |
1 |
0.000347 |
| 75800 |
1 |
0.000347 |
| 77400 |
1 |
0.000347 |
| 78800 |
1 |
0.000347 |
| 82400 |
1 |
0.000347 |
| 93500 |
1 |
0.000347 |
| 122000 |
1 |
0.000347 |
| 129000 |
1 |
0.000347 |
| 140000 |
1 |
0.000347 |
| 145000 |
1 |
0.000347 |
| 153000 |
1 |
0.000347 |
| 161000 |
1 |
0.000347 |
| 169000 |
1 |
0.000347 |
| 171000 |
1 |
0.000347 |
| 178000 |
1 |
0.000347 |
| 184000 |
1 |
0.000347 |
| 186000 |
1 |
0.000347 |
| 186000 |
1 |
0.000347 |
| 202000 |
1 |
0.000347 |
| 226000 |
1 |
0.000347 |
| 245000 |
1 |
0.000347 |
| 279000 |
1 |
0.000347 |
| 292000 |
1 |
0.000347 |
| 292000 |
1 |
0.000347 |
| 305000 |
1 |
0.000347 |
| 321000 |
1 |
0.000347 |
| 334000 |
1 |
0.000347 |
|
CL41 ----> CL31
No. of shared pairs: :2249
CL41 ----> CL102
No. of shared pairs: :1904
CL41 ----> CL182
No. of shared pairs: :559
CL41 ----> CL4
No. of shared pairs: :135
CL41 ----> CL1
No. of shared pairs: :17
CL41 ----> CL12
No. of shared pairs: :12
CL41 ----> CL5
No. of shared pairs: :11
CL41 ----> CL6
No. of shared pairs: :11
CL41 ----> CL53
No. of shared pairs: :11
CL41 ----> CL25
No. of shared pairs: :10