Cluster no. 56

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Cluster is part of supercluster: 35

Cluster characteristics:

size 19317
size_real 19317
ecount 13460607
supercluster 35
annotations_summary
pair_completeness 0.955161943319838
pbs_score 0.0
TR_score 0.4224082191780822
TR_monomer_length 805.0
loop_index 0.995426670824239
satellite_probability 0.980780017756054
consensus 
AAATTGCTTTAAGAACAATTTTAAACGATTACAAATGCTTTAAAAACAATTAGAAATGCTTTAAAATGATTTTAAAATAT
TTTTCGAAACATCCTAAAATGGTTTCAAAATAATTTAAAATGTTTTAAAGACATTTTTAAATGCTTTCAAAATAGTTTTA
AATGCTTTAAAAACAATTTTAAACGCTTTAGAATGAATTTAAAAGGCTTTAAAAACAATCTAAGATGCTTTAACATGTTT
TTAAAACGCTTTACAAACAATTTCGAATGCTTTCAAAACAATATAAAATGTTTTCAAAACAATTTAAAATGTTTTCGATA
CAATTTAAAATGCTCTAAGAACAACTCAAAACAATTTAAAATGGTTTACAAACAATTTTAAAAGTTCAAAACAATTTAAA
ACACTTTAAAATGGTTTAAAAACAATATTAAAATGGTTTAGAAACAATTTGAAATGCTTTAACAACAATTTAAAAAGCTT
TAAAATGCTTTGAAAACAATTTAAAACACTTTAAAAATTGTTTACAATACTTTCAAAACAATTTTAAACCATTTGAATTG
CTTTAAGAACAATTTTAAATGTTTTTAAAATGCTTCAAAAACAATTTACGATGTTTTAAAGACATTTTTAAATTCTTTAA
AAATAAGTTTAAGTGCTTTATGAACCATCGAAAATGCTCTAAAACCATTTTAAAATGTTCTAAAAACAATTTTGAAAAGG
TTTAAAGAACTTTAATAACAATTTAAAATGCTTAAACACAGTTTACAATGTTTTCAAAACGAATTAAAATACTTCAAAAT
AATTT

  

  

    TAREAN_annotation
    Putative satellite (high confidence)
  

  

    orientation_score
    0.999994326401252
  

 


 
 protein domains:



No protein domains detected



protein domains:


  





 
 Reads annotation summary



No similarity hits to repeat databases found


 
 clusters with similarity:



  

    
      



 

    Cluster
    Number of similarity hits
  

      

   		
 

 

   
     

       



  

    213
    2
  

       

     

  		
 




 
 clusters connected through mates:



  

    
      




 

    Cluster
    Number of shared
 read pairs		
    k
  

      

   		
 

 

   
     

       




  

    27
    7
    0.00468
  

  

    24
    5
    0.00156
  

  

    2
    4
    0.000705
  

  

    3
    4
    0.00106
  

  

    7
    4
    0.000863
  

  

    74
    4
    0.00245
  

  

    85
    4
    0.00265
  

  

    86
    4
    0.00153
  

  

    94
    4
    0.00776
  

  

    121
    4
    0.00554
  

  

    6
    3
    0.000766
  

  

    10
    3
    0.00194
  

  

    17
    3
    0.000511
  

  

    18
    3
    0.00151
  

  

    20
    3
    0.000841
  

  

    22
    3
    0.00105
  

  

    23
    3
    0.0012
  

  

    29
    3
    0.00152
  

  

    34
    3
    0.00119
  

  

    66
    3
    0.00102
  

  

    83
    3
    0.00218
  

  

    99
    3
    0.00341
  

  

    106
    3
    0.00189
  

  

    109
    3
    0.00334
  

  

    170
    3
    0.00236
  

  

    213
    3
    0.00233
  

  

    1
    2
    0.000549
  

  

    16
    2
    0.000745
  

  

    19
    2
    0.000979
  

  

    37
    2
    0.000617
  

  

    39
    2
    0.00124
  

  

    40
    2
    0.000542
  

  

    41
    2
    0.000644
  

  

    43
    2
    0.00073
  

  

    44
    2
    0.000637
  

  

    46
    2
    0.00115
  

  

    61
    2
    0.00111
  

  

    63
    2
    0.000639
  

  

    73
    2
    0.00192
  

  

    77
    2
    0.00139
  

  

    78
    2
    0.000751
  

  

    82
    2
    0.0017
  

  

    84
    2
    0.00116
  

  

    87
    2
    0.00134
  

  

    90
    2
    0.00078
  

  

    100
    2
    0.00176
  

  

    108
    2
    0.00199
  

  

    110
    2
    0.00187
  

  

    119
    2
    0.00267
  

  

    130
    2
    0.000902
  

  

    131
    2
    0.00418
  

  

    144
    2
    0.0028
  

  

    145
    2
    0.00125
  

  

    146
    2
    0.00213
  

  

    153
    2
    0.00134
  

  

    169
    2
    0.00214
  

  

    180
    2
    0.00322
  

  

    199
    2
    0.00412
  

  

    210
    2
    0.0054
  

  

    233
    2
    0.00533
  

  

    237
    2
    0.00373
  

  

    4
    1
    0.000282
  

  

    11
    1
    0.000272
  

  

    12
    1
    0.000239
  

  

    13
    1
    0.000612
  

  

    14
    1
    0.000287
  

  

    15
    1
    0.000397
  

  

    21
    1
    0.000404
  

  

    25
    1
    0.000502
  

  

    26
    1
    0.000449
  

  

    28
    1
    0.000625
  

  

    32
    1
    0.000607
  

  

    33
    1
    0.000671
  

  

    42
    1
    0.000509
  

  

    49
    1
    0.000537
  

  

    51
    1
    0.000332
  

  

    52
    1
    5e-04
  

  

    53
    1
    0.000331
  

  

    55
    1
    0.000259
  

  

    57
    1
    0.000821
  

  

    58
    1
    0.000975
  

  

    59
    1
    0.000783
  

  

    65
    1
    0.00068
  

  

    68
    1
    0.000616
  

  

    69
    1
    0.000805
  

  

    71
    1
    0.000414
  

  

    72
    1
    0.000689
  

  

    76
    1
    0.000656
  

  

    79
    1
    0.00039
  

  

    80
    1
    0.000654
  

  

    81
    1
    0.000416
  

  

    88
    1
    0.000404
  

  

    91
    1
    0.00114
  

  

    97
    1
    0.000574
  

  

    98
    1
    0.000923
  

  

    101
    1
    0.000588
  

  

    103
    1
    0.000461
  

  

    107
    1
    0.00111
  

  

    116
    1
    0.000449
  

  

    122
    1
    0.00071
  

  

    123
    1
    0.000817
  

  

    124
    1
    0.000915
  

  

    125
    1
    0.00105
  

  

    128
    1
    0.0011
  

  

    129
    1
    0.00125
  

  

    132
    1
    0.00105
  

  

    136
    1
    0.00126
  

  

    143
    1
    0.000722
  

  

    147
    1
    0.000358
  

  

    148
    1
    0.000805
  

  

    149
    1
    0.00113
  

  

    150
    1
    0.000849
  

  

    155
    1
    0.00106
  

  

    157
    1
    0.00102
  

  

    160
    1
    0.000951
  

  

    163
    1
    0.000677
  

  

    165
    1
    0.000725
  

  

    168
    1
    0.000741
  

  

    172
    1
    0.000733
  

  

    173
    1
    0.00142
  

  

    175
    1
    0.00126
  

  

    177
    1
    0.00153
  

  

    178
    1
    0.00147
  

  

    184
    1
    0.00161
  

  

    187
    1
    0.00119
  

  

    189
    1
    0.000857
  

  

    190
    1
    0.00104
  

  

    191
    1
    0.000876
  

  

    195
    1
    0.00171
  

  

    202
    1
    0.00189
  

  

    203
    1
    0.00131
  

  

    205
    1
    0.00118
  

  

    208
    1
    0.00163
  

  

    212
    1
    0.00182
  

  

    214
    1
    0.00188
  

  

    218
    1
    0.00235
  

  

    229
    1
    0.00121
  

  

    231
    1
    0.00246
  

  

    235
    1
    0.00118
  

  

    244
    1
    0.00304
  

  

    245
    1
    0.00122
  

  

    257
    1
    0.0029
  

  

    262
    1
    0.00363
  

  

    267
    1
    0.00168
  

  

    278
    1
    0.00283
  

  

    290
    1
    0.0035
  

  

    292
    1
    0.00214
  

  

    293
    1
    0.00287
  

  

    312
    1
    0.00424
  

  

    325
    1
    0.00365
  

  

    329
    1
    0.00394
  

  

    417
    1
    0.00358
  

  

    456
    1
    0.00398
  

  

    612
    1
    0.00421
  

  

    617
    1
    0.00424
  

  

    1020
    1
    0.00418
  

  

    1120
    1
    0.0044
  

  

    1240
    1
    0.00428
  

  

    2010
    1
    0.00433
  

  

    2370
    1
    0.00431
  

  

    2760
    1
    0.00438
  

  

    5580
    1
    0.00445
  

  

    5590
    1
    0.00442
  

  

    5780
    1
    0.00442
  

  

    7340
    1
    0.00446
  

  

    8660
    1
    0.00445
  

  

    8780
    1
    0.00445
  

  

    11400
    1
    0.00445
  

  

    11600
    1
    0.00445
  

  

    13600
    1
    0.00446
  

  

    16500
    1
    0.00445
  

  

    22600
    1
    0.00446
  

  

    28500
    1
    0.00448
  

  

    29100
    1
    0.00448
  

  

    31500
    1
    0.00449
  

  

    33800
    1
    0.00447
  

  

    47100
    1
    0.0045
  

  

    47700
    1
    0.00448
  

  

    52600
    1
    0.0045
  

  

    54000
    1
    0.00448
  

  

    54500
    1
    0.00448
  

  

    68900
    1
    0.00448
  

  

    97700
    1
    0.00449
  

  

    160000
    1
    0.00449
  

  

    174000
    1
    0.00449
  

  

    181000
    1
    0.00449
  

  

    195000
    1
    0.00449
  

  

    208000
    1
    0.00449
  

  

    214000
    1
    0.00449
  

  

    236000
    1
    0.00449
  

  

    250000
    1
    0.00449
  

  

    262000
    1
    0.00449
  

  

    272000
    1
    0.00449
  

  

    299000
    1
    0.00449
  

  

    305000
    1
    0.00449
  

  

    305000
    1
    0.00449
  

  

    347000
    1
    0.00449