Cluster no. 57
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Cluster is part of supercluster: 1
Cluster characteristics:
| size |
19282 |
| size_real |
19282 |
| ecount |
1783646 |
| supercluster |
1 |
| annotations_summary |
|
| pair_completeness |
0.812558751645046 |
| pbs_score |
None |
| TR_score |
None |
| TR_monomer_length |
None |
| loop_index |
0.0105279535317913 |
| satellite_probability |
3.28054772597604e-22 |
| consensus |
None |
| TAREAN_annotation |
Other |
| orientation_score |
1 |
protein domains:
No protein domains detected
protein domains:
Reads annotation summary
No similarity hits to repeat databases found
clusters with similarity:
| Cluster |
Number of similarity hits |
|
| 72 |
3280 |
| 58 |
3140 |
| 228 |
488 |
| 106 |
429 |
| 179 |
205 |
| 74 |
34 |
| 101 |
16 |
| 43 |
4 |
| 95 |
1 |
|
clusters connected through mates:
| Cluster |
Number of shared
read pairs |
k |
|
| 58 |
464 |
0.258 |
| 72 |
422 |
0.189 |
| 179 |
150 |
0.0946 |
| 228 |
119 |
0.0967 |
| 74 |
30 |
0.0125 |
| 15 |
11 |
0.00334 |
| 43 |
8 |
0.00228 |
| 106 |
7 |
0.00296 |
| 31 |
6 |
0.00102 |
| 42 |
6 |
0.00219 |
| 67 |
6 |
0.00194 |
| 1 |
5 |
0.00113 |
| 11 |
5 |
0.00112 |
| 14 |
5 |
0.00117 |
| 21 |
5 |
0.00154 |
| 22 |
5 |
0.00138 |
| 23 |
5 |
0.00153 |
| 40 |
5 |
0.00112 |
| 50 |
5 |
0.00194 |
| 114 |
5 |
0.0031 |
| 3500 |
5 |
0.00498 |
| 5 |
4 |
0.00159 |
| 12 |
4 |
0.000807 |
| 13 |
4 |
0.00166 |
| 17 |
4 |
0.000602 |
| 29 |
4 |
0.00146 |
| 41 |
4 |
0.00103 |
| 44 |
4 |
0.00102 |
| 48 |
4 |
0.000965 |
| 51 |
4 |
0.00106 |
| 55 |
4 |
0.000862 |
| 68 |
4 |
0.00167 |
| 101 |
4 |
0.00162 |
| 125 |
4 |
0.00231 |
| 245 |
4 |
0.00251 |
| 11300 |
4 |
0.004 |
| 18900 |
4 |
0.004 |
| 3 |
3 |
0.000662 |
| 4 |
3 |
0.000693 |
| 6 |
3 |
0.000639 |
| 10 |
3 |
0.00129 |
| 16 |
3 |
0.000867 |
| 18 |
3 |
0.00109 |
| 19 |
3 |
0.00106 |
| 20 |
3 |
0.000691 |
| 34 |
3 |
0.000911 |
| 59 |
3 |
0.00146 |
| 64 |
3 |
0.00162 |
| 65 |
3 |
0.00134 |
| 66 |
3 |
0.000804 |
| 78 |
3 |
0.000872 |
| 85 |
3 |
0.00131 |
| 86 |
3 |
0.000884 |
| 104 |
3 |
0.00167 |
| 113 |
3 |
0.00133 |
| 119 |
3 |
0.00197 |
| 7 |
2 |
0.00037 |
| 8 |
2 |
0.000789 |
| 9 |
2 |
0.000562 |
| 26 |
2 |
0.000667 |
| 27 |
2 |
0.00088 |
| 33 |
2 |
0.000883 |
| 36 |
2 |
0.000802 |
| 37 |
2 |
0.000498 |
| 47 |
2 |
0.000587 |
| 49 |
2 |
0.000759 |
| 52 |
2 |
0.00072 |
| 61 |
2 |
0.000776 |
| 63 |
2 |
0.000512 |
| 71 |
2 |
0.000627 |
| 76 |
2 |
0.000869 |
| 77 |
2 |
0.000901 |
| 84 |
2 |
0.000798 |
| 90 |
2 |
0.000599 |
| 92 |
2 |
0.00126 |
| 93 |
2 |
0.00115 |
| 95 |
2 |
0.00104 |
| 103 |
2 |
0.000679 |
| 109 |
2 |
0.0012 |
| 115 |
2 |
0.000739 |
| 126 |
2 |
0.00095 |
| 129 |
2 |
0.00127 |
| 132 |
2 |
0.00116 |
| 133 |
2 |
0.000542 |
| 148 |
2 |
0.000991 |
| 164 |
2 |
0.00166 |
| 167 |
2 |
0.000867 |
| 175 |
2 |
0.00127 |
| 176 |
2 |
0.00135 |
| 180 |
2 |
0.00143 |
| 181 |
2 |
0.00116 |
| 201 |
2 |
0.00182 |
| 218 |
2 |
0.00167 |
| 305 |
2 |
0.00192 |
| 559 |
2 |
0.00193 |
| 1950 |
2 |
0.00199 |
| 12500 |
2 |
0.002 |
| 76500 |
2 |
0.002 |
| 184000 |
2 |
0.002 |
| 185000 |
2 |
0.002 |
| 212000 |
2 |
0.002 |
| 215000 |
2 |
0.002 |
| 277000 |
2 |
0.002 |
| 348000 |
2 |
0.002 |
| 2 |
1 |
0.000155 |
| 25 |
1 |
0.000361 |
| 35 |
1 |
0.000242 |
| 39 |
1 |
0.000418 |
| 45 |
1 |
0.000279 |
| 46 |
1 |
0.000398 |
| 53 |
1 |
0.000264 |
| 54 |
1 |
0.00051 |
| 56 |
1 |
0.000821 |
| 62 |
1 |
0.000278 |
| 70 |
1 |
0.000547 |
| 73 |
1 |
0.000551 |
| 75 |
1 |
0.000256 |
| 79 |
1 |
3e-04 |
| 82 |
1 |
0.000513 |
| 83 |
1 |
0.000465 |
| 87 |
1 |
0.00044 |
| 88 |
1 |
0.000308 |
| 89 |
1 |
0.000439 |
| 91 |
1 |
0.000606 |
| 94 |
1 |
0.000775 |
| 96 |
1 |
0.000509 |
| 97 |
1 |
0.000397 |
| 98 |
1 |
0.000538 |
| 105 |
1 |
0.000415 |
| 108 |
1 |
0.000561 |
| 111 |
1 |
0.000287 |
| 118 |
1 |
0.000563 |
| 124 |
1 |
0.000535 |
| 131 |
1 |
0.000797 |
| 134 |
1 |
0.00045 |
| 135 |
1 |
0.000516 |
| 136 |
1 |
0.000637 |
| 139 |
1 |
0.000483 |
| 140 |
1 |
0.000346 |
| 142 |
1 |
0.000555 |
| 144 |
1 |
0.000671 |
| 145 |
1 |
0.000421 |
| 147 |
1 |
0.00028 |
| 150 |
1 |
0.000512 |
| 151 |
1 |
0.000536 |
| 153 |
1 |
0.000441 |
| 154 |
1 |
0.000653 |
| 155 |
1 |
0.000583 |
| 158 |
1 |
0.000518 |
| 159 |
1 |
0.000561 |
| 163 |
1 |
0.000444 |
| 168 |
1 |
0.000471 |
| 169 |
1 |
0.000584 |
| 171 |
1 |
0.000548 |
| 177 |
1 |
7e-04 |
| 184 |
1 |
0.000716 |
| 187 |
1 |
0.000619 |
| 188 |
1 |
0.000907 |
| 192 |
1 |
0.000903 |
| 205 |
1 |
0.000617 |
| 207 |
1 |
0.000798 |
| 212 |
1 |
0.000755 |
| 217 |
1 |
0.000665 |
| 219 |
1 |
0.000773 |
| 222 |
1 |
0.000735 |
| 225 |
1 |
0.000836 |
| 227 |
1 |
0.000771 |
| 231 |
1 |
0.000846 |
| 233 |
1 |
0.000869 |
| 238 |
1 |
0.000782 |
| 240 |
1 |
0.000931 |
| 241 |
1 |
0.000784 |
| 249 |
1 |
0.000806 |
| 251 |
1 |
0.000855 |
| 258 |
1 |
0.000659 |
| 277 |
1 |
0.000887 |
| 285 |
1 |
0.000888 |
| 307 |
1 |
0.000901 |
| 308 |
1 |
0.000926 |
| 314 |
1 |
0.000887 |
| 320 |
1 |
0.000968 |
| 358 |
1 |
0.000958 |
| 370 |
1 |
0.000961 |
| 417 |
1 |
0.000948 |
| 435 |
1 |
0.000922 |
| 449 |
1 |
0.000962 |
| 536 |
1 |
0.000957 |
| 548 |
1 |
0.000976 |
| 733 |
1 |
0.000984 |
| 739 |
1 |
0.000972 |
| 771 |
1 |
0.000983 |
| 1240 |
1 |
0.00099 |
| 1480 |
1 |
0.000996 |
| 1490 |
1 |
0.000992 |
| 1700 |
1 |
0.000998 |
| 1900 |
1 |
0.000995 |
| 2070 |
1 |
0.000995 |
| 2200 |
1 |
0.000994 |
| 3190 |
1 |
0.000998 |
| 5300 |
1 |
0.000997 |
| 6030 |
1 |
0.000999 |
| 6210 |
1 |
0.001 |
| 6720 |
1 |
0.000999 |
| 6790 |
1 |
0.000999 |
| 11800 |
1 |
0.000999 |
| 12100 |
1 |
0.001 |
| 12200 |
1 |
0.001 |
| 13500 |
1 |
0.001 |
| 14900 |
1 |
0.001 |
| 16900 |
1 |
0.001 |
| 17700 |
1 |
0.001 |
| 20500 |
1 |
0.001 |
| 22500 |
1 |
0.001 |
| 23700 |
1 |
0.001 |
| 24600 |
1 |
0.001 |
| 29200 |
1 |
0.001 |
| 32200 |
1 |
0.001 |
| 32400 |
1 |
0.001 |
| 34500 |
1 |
0.001 |
| 41100 |
1 |
0.001 |
| 41500 |
1 |
0.001 |
| 43700 |
1 |
0.001 |
| 45100 |
1 |
0.001 |
| 48100 |
1 |
0.001 |
| 49900 |
1 |
0.001 |
| 51200 |
1 |
0.001 |
| 52400 |
1 |
0.001 |
| 56100 |
1 |
0.001 |
| 57100 |
1 |
0.001 |
| 57400 |
1 |
0.001 |
| 74600 |
1 |
0.001 |
| 77400 |
1 |
0.001 |
| 89100 |
1 |
0.001 |
| 108000 |
1 |
0.001 |
| 109000 |
1 |
0.001 |
| 112000 |
1 |
0.001 |
| 118000 |
1 |
0.001 |
| 124000 |
1 |
0.001 |
| 142000 |
1 |
0.001 |
| 149000 |
1 |
0.001 |
| 179000 |
1 |
0.001 |
| 190000 |
1 |
0.001 |
| 201000 |
1 |
0.001 |
| 236000 |
1 |
0.001 |
| 241000 |
1 |
0.001 |
| 254000 |
1 |
0.001 |
| 259000 |
1 |
0.001 |
| 290000 |
1 |
0.001 |
| 291000 |
1 |
0.001 |
| 320000 |
1 |
0.001 |
| 327000 |
1 |
0.001 |
| 349000 |
1 |
0.001 |
|
CL57 ----> CL58
No. of shared pairs: :464
CL57 ----> CL72
No. of shared pairs: :422
CL57 ----> CL179
No. of shared pairs: :150
CL57 ----> CL228
No. of shared pairs: :119
CL57 ----> CL74
No. of shared pairs: :30
CL57 ----> CL15
No. of shared pairs: :11