Cluster no. 135

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Cluster is part of supercluster: 1

Cluster characteristics:

size 10857
size_real 10857
ecount 711733
supercluster 1
annotations_summary
pair_completeness 0.704395604395604
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00165791655153357
satellite_probability 1.64859681984477e-22
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
1 8610
83 5430
106 3
301 2
17 1

clusters connected through mates:

Cluster Number of shared
read pairs		 k
83 770 0.368
1 759 0.174
4 8 0.00187
3 5 0.00112
5 4 0.00162
23 4 0.00124
102 4 0.00124
9 3 0.000857
12 3 0.000612
14 3 0.000714
16 3 0.000881
17 3 0.000456
19 3 0.00109
31 3 0.000514
40 3 0.000681
53 3 0.000803
67 3 0.00099
85 3 0.00134
98 3 0.00166
301 3 0.00287
6 2 0.000431
7 2 0.000373
10 2 0.000881
13 2 0.00085
18 2 0.00074
32 2 0.000845
35 2 0.00049
36 2 0.000821
41 2 0.000523
46 2 0.000813
48 2 0.000489
59 2 0.001
74 2 0.000851
79 2 0.000609
96 2 0.00105
107 2 0.00123
110 2 0.00112
120 2 0.000908
123 2 0.00103
124 2 0.0011
133 2 0.00055
142 2 0.00115
170 2 0.001
182 2 0.00117
211 2 0.00139
2 1 0.000156
8 1 0.000403
15 1 0.000309
20 1 0.000233
24 1 0.000255
29 1 0.000372
33 1 0.000452
34 1 0.000309
37 1 0.000252
42 1 0.000373
43 1 0.000289
45 1 0.000284
49 1 0.000388
50 1 0.000396
51 1 0.000268
57 1 0.000516
58 1 0.000573
60 1 0.000506
63 1 0.00026
64 1 0.000557
65 1 0.000457
66 1 0.000272
68 1 0.000427
71 1 0.000319
75 1 0.00026
77 1 0.000462
80 1 0.000444
82 1 0.000528
84 1 0.000408
87 1 0.000451
88 1 0.000313
92 1 0.000651
97 1 0.000406
100 1 0.000539
101 1 0.000413
104 1 0.000573
106 1 0.000434
108 1 0.00058
109 1 0.000618
114 1 0.000641
115 1 0.000377
122 1 0.00047
127 1 0.000475
128 1 0.000614
136 1 0.000661
139 1 0.000496
140 1 0.000352
141 1 0.000463
148 1 0.00051
152 1 0.000378
154 1 0.000678
155 1 0.000602
157 1 0.000589
158 1 0.000533
160 1 0.000564
161 1 0.000449
162 1 0.000478
171 1 0.000565
176 1 0.000704
178 1 0.000714
179 1 0.000653
190 1 0.000593
194 1 0.000894
198 1 0.000744
200 1 0.000565
205 1 0.000639
208 1 0.00075
209 1 0.000876
210 1 0.000917
218 1 0.000873
226 1 0.000872
234 1 0.000908
237 1 0.000796
238 1 0.000818
245 1 0.00065
256 1 0.000849
264 1 0.000858
266 1 0.00089
267 1 0.000761
293 1 0.000936
314 1 0.000932
381 1 0.000941
390 1 0.00101
411 1 0.00103
421 1 0.00104
587 1 0.00106
823 1 0.00103
847 1 0.00104
1050 1 0.00104
6180 1 0.00106
14000 1 0.00106
15500 1 0.00106
17800 1 0.00106
19800 1 0.00106
24100 1 0.00106
34700 1 0.00106
36100 1 0.00106
41100 1 0.00106
41600 1 0.00106
45200 1 0.00106
56200 1 0.00106
60600 1 0.00106
66900 1 0.00106
71200 1 0.00106
79800 1 0.00106
114000 1 0.00106
149000 1 0.00106
154000 1 0.00106
157000 1 0.00106
302000 1 0.00106
308000 1 0.00106
326000 1 0.00106
340000 1 0.00106

CL135 ----> CL83

image

No. of shared pairs: :770

CL135 ----> CL1

image

No. of shared pairs: :759