Cluster no. 136

Go back to cluster table

Cluster is part of supercluster: 6

Cluster characteristics:

size 10769
size_real 10769
ecount 188406
supercluster 6
annotations_summary
pair_completeness 0.807789155615243
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00157860525582691
satellite_probability 2.15940292115794e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
84 292
112 124
97 1
142 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
112 271 0.223
84 263 0.126
960 21 0.0352
1140 7 0.012
3 6 0.00146
3010 6 0.0104
3470 5 0.00861
4 4 0.00102
9 4 0.00128
13 4 0.00202
37 4 0.00111
130 4 0.00156
6260 4 0.00693
33100 4 0.00696
7 3 0.000602
25 3 0.00128
30 3 0.000733
50 3 0.00139
66 3 0.000908
126 3 0.00179
2510 3 0.00519
5720 3 0.0052
6700 3 0.0052
7550 3 0.00521
18400 3 0.00521
24100 3 0.00522
50900 3 0.00523
1 2 5e-04
10 2 0.00105
14 2 0.000522
16 2 0.000659
19 2 0.000836
23 2 0.000703
33 2 0.00109
38 2 0.00116
40 2 0.000495
43 2 0.000647
59 2 0.00123
61 2 0.000929
68 2 0.00101
85 2 0.00107
87 2 0.00108
93 2 0.00151
94 2 0.00231
97 2 0.000956
99 2 0.00163
102 2 0.000701
105 2 0.00101
107 2 0.00159
141 2 0.00112
169 2 0.00155
182 2 0.00149
7590 2 0.00347
8730 2 0.00348
13500 2 0.00348
25600 2 0.00348
27900 2 0.00348
53400 2 0.00348
59700 2 0.00348
77700 2 0.00348
80200 2 0.00348
156000 2 0.00349
229000 2 0.00349
305000 2 0.00349
333000 2 0.00349
336000 2 0.00349
2 1 0.000166
5 1 0.000478
6 1 0.000234
12 1 0.000221
17 1 0.000161
20 1 0.000255
21 1 0.000354
22 1 0.000312
27 1 0.000541
28 1 0.000513
29 1 0.000431
31 1 0.000183
32 1 5e-04
36 1 0.000483
39 1 0.000508
46 1 0.000478
48 1 0.000269
49 1 0.000452
54 1 0.000651
56 1 0.00126
57 1 0.000637
58 1 0.000726
62 1 0.000315
67 1 0.000376
69 1 0.000628
71 1 0.000362
73 1 0.000719
77 1 0.000557
79 1 0.000343
80 1 0.000532
81 1 0.000363
88 1 0.000354
91 1 0.000816
96 1 0.000649
98 1 0.000697
100 1 0.000673
103 1 0.000397
106 1 0.000516
110 1 0.000704
111 1 0.000326
114 1 0.00084
117 1 0.000582
124 1 0.000693
125 1 0.000767
133 1 0.000306
135 1 0.000661
140 1 0.000405
143 1 0.000576
148 1 0.000628
149 1 0.00081
154 1 0.000903
161 1 0.000538
162 1 0.000581
168 1 0.000588
172 1 0.000583
173 1 0.00095
175 1 0.000873
177 1 0.000996
178 1 0.00097
184 1 0.00103
186 1 0.000549
191 1 0.00067
194 1 0.00134
200 1 0.000715
208 1 0.00104
217 1 0.000927
219 1 0.00115
234 1 0.00137
236 1 0.0016
238 1 0.00117
245 1 0.000855
247 1 0.000942
251 1 0.00134
261 1 0.00161
272 1 0.00107
274 1 0.00153
338 1 0.00166
781 1 0.00165
837 1 0.00172
1200 1 0.00172
1260 1 0.00173
1340 1 0.00172
2080 1 0.00172
2090 1 0.00173
3920 1 0.00173
4690 1 0.00173
5450 1 0.00173
6950 1 0.00174
8290 1 0.00173
8920 1 0.00173
9600 1 0.00174
9660 1 0.00174
11900 1 0.00174
11900 1 0.00174
13400 1 0.00174
17100 1 0.00174
20600 1 0.00174
21000 1 0.00174
24800 1 0.00175
27000 1 0.00174
30700 1 0.00174
31200 1 0.00174
35500 1 0.00174
37800 1 0.00174
38300 1 0.00174
41700 1 0.00174
45400 1 0.00174
47700 1 0.00175
51300 1 0.00175
57800 1 0.00174
58700 1 0.00174
62300 1 0.00175
62400 1 0.00174
69000 1 0.00174
79700 1 0.00174
121000 1 0.00174
123000 1 0.00174
136000 1 0.00174
154000 1 0.00174
157000 1 0.00174
162000 1 0.00174
171000 1 0.00174
184000 1 0.00174
226000 1 0.00174
254000 1 0.00174
268000 1 0.00174
269000 1 0.00174
275000 1 0.00174
313000 1 0.00174
328000 1 0.00174
344000 1 0.00174

CL136 ----> CL112

image

No. of shared pairs: :271

CL136 ----> CL84

image

No. of shared pairs: :263

CL136 ----> CL960

image

No. of shared pairs: :21