Cluster no. 142

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Cluster is part of supercluster: 65

Cluster characteristics:

size 10225
size_real 10225
ecount 71893
supercluster 65
annotations_summary
pair_completeness 0.728071657934764
pbs_score None
TR_score None
TR_monomer_length None
loop_index 9.7799511002445e-05
satellite_probability 9.81425038973844e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
50 81
84 29
33 1
130 1
136 1
191 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
84 161 0.0696
50 154 0.0646
859 13 0.0158
485 10 0.0118
1650 10 0.0123
17 8 0.00124
5270 7 0.00865
535 6 0.00718
6000 6 0.00741
7010 6 0.00743
9800 6 0.00743
2 5 0.000799
4 5 0.00121
15 5 0.00161
31 5 0.000877
7940 5 0.00617
8980 5 0.00618
14 4 0.000984
16 4 0.00122
37 4 0.00105
66 4 0.00113
2000 4 0.00489
4520 4 0.00494
5310 4 0.00494
18100 4 0.00496
27700 4 0.00496
31400 4 0.00496
7 3 0.000575
9 3 0.000892
12 3 0.00063
22 3 0.000872
48 3 0.000759
67 3 0.00104
73 3 0.00185
102 3 0.000972
130 3 0.00107
179 3 0.00215
2820 3 0.0037
4590 3 0.00372
9220 3 0.00372
9630 3 0.00371
12200 3 0.00372
13800 3 0.00372
14400 3 0.00372
15100 3 0.00372
17800 3 0.00372
23700 3 0.00372
27100 3 0.00372
60500 3 0.00372
80000 3 0.00372
83600 3 0.00372
3 2 0.000461
6 2 0.000444
8 2 0.000854
10 2 0.000938
13 2 0.000902
21 2 0.000654
29 2 0.000784
36 2 0.000869
38 2 0.00102
41 2 0.000542
47 2 0.000622
59 2 0.00108
69 2 0.0011
76 2 0.000949
77 2 0.000987
86 2 0.000625
87 2 0.000962
95 2 0.00116
109 2 0.00135
114 2 0.00141
125 2 0.0013
134 2 0.000986
135 2 0.00115
153 2 0.000964
154 2 0.00149
180 2 0.00166
222 2 0.00171
4850 2 0.00247
5330 2 0.00247
7580 2 0.00248
10000 2 0.00248
10900 2 0.00248
12000 2 0.00247
12000 2 0.00248
14800 2 0.00248
15800 2 0.00248
19100 2 0.00248
27800 2 0.00248
30300 2 0.00248
31600 2 0.00248
34800 2 0.00248
37300 2 0.00248
37900 2 0.00248
50100 2 0.00248
61300 2 0.00248
63200 2 0.00248
74100 2 0.00248
75600 2 0.00248
75600 2 0.00248
80800 2 0.00248
85400 2 0.00248
94400 2 0.00248
121000 2 0.00248
156000 2 0.00248
157000 2 0.00248
160000 2 0.00248
162000 2 0.00248
170000 2 0.00248
185000 2 0.00248
185000 2 0.00248
193000 2 0.00248
198000 2 0.00248
2e+05 2 0.00248
205000 2 0.00248
211000 2 0.00248
221000 2 0.00248
221000 2 0.00248
247000 2 0.00248
263000 2 0.00248
275000 2 0.00248
287000 2 0.00248
305000 2 0.00248
313000 2 0.00248
324000 2 0.00248
325000 2 0.00248
336000 2 0.00248
341000 2 0.00248
345000 2 0.00248
1 1 0.000236
18 1 0.00039
19 1 0.000381
30 1 0.000231
33 1 0.000482
34 1 0.000323
35 1 0.000254
40 1 0.000234
42 1 0.000393
43 1 0.000301
44 1 0.000269
45 1 0.000295
46 1 0.000431
49 1 0.000409
52 1 0.000387
54 1 0.000565
57 1 0.000555
60 1 0.000544
65 1 0.000487
72 1 0.000492
80 1 0.000473
81 1 0.000335
83 1 0.000511
93 1 0.000644
94 1 0.00091
97 1 0.00043
103 1 0.000363
104 1 0.000622
106 1 0.000461
107 1 0.000672
110 1 0.000605
116 1 0.000356
119 1 0.00075
122 1 0.000502
140 1 0.00037
141 1 0.000495
145 1 0.000458
148 1 0.000548
155 1 0.000656
156 1 0.000616
157 1 0.00064
162 1 0.000512
163 1 0.000485
168 1 0.000517
169 1 0.000658
173 1 0.000778
182 1 0.000635
186 1 0.000487
187 1 0.000703
192 1 0.00109
194 1 0.00102
198 1 0.000829
200 1 0.000613
203 1 0.000743
205 1 0.000701
209 1 0.000995
210 1 0.00105
218 1 0.000992
221 1 0.000962
229 1 0.000708
237 1 0.000894
241 1 0.000924
242 1 0.000792
247 1 0.000773
249 1 0.000954
250 1 0.00104
252 1 0.000932
259 1 0.000989
269 1 0.00107
376 1 0.00111
421 1 0.00122
505 1 0.00117
550 1 0.00119
655 1 0.00121
883 1 0.00121
1170 1 0.00122
1320 1 0.00122
1730 1 0.00123
2330 1 0.00123
3470 1 0.00123
3940 1 0.00123
8620 1 0.00124
9330 1 0.00124
9920 1 0.00124
10100 1 0.00124
10400 1 0.00124
10900 1 0.00124
11900 1 0.00124
12100 1 0.00124
14100 1 0.00124
14800 1 0.00124
15300 1 0.00124
16200 1 0.00124
16700 1 0.00124
18500 1 0.00124
18600 1 0.00124
18900 1 0.00124
19200 1 0.00124
20300 1 0.00124
20800 1 0.00124
24500 1 0.00124
24600 1 0.00124
27600 1 0.00124
31000 1 0.00124
31500 1 0.00124
31700 1 0.00124
33900 1 0.00124
34200 1 0.00124
40500 1 0.00124
40700 1 0.00124
41200 1 0.00124
42400 1 0.00124
43100 1 0.00124
43500 1 0.00124
43800 1 0.00124
47500 1 0.00124
49200 1 0.00124
49300 1 0.00124
49400 1 0.00124
50500 1 0.00124
50500 1 0.00124
52200 1 0.00124
52800 1 0.00124
54300 1 0.00124
57200 1 0.00124
58900 1 0.00124
61200 1 0.00124
66300 1 0.00124
70300 1 0.00124
71500 1 0.00124
76300 1 0.00124
79400 1 0.00124
80800 1 0.00124
80800 1 0.00124
83800 1 0.00124
86600 1 0.00124
92300 1 0.00124
93600 1 0.00124
96900 1 0.00124
98500 1 0.00124
115000 1 0.00124
115000 1 0.00124
119000 1 0.00124
123000 1 0.00124
138000 1 0.00124
155000 1 0.00124
158000 1 0.00124
159000 1 0.00124
167000 1 0.00124
170000 1 0.00124
174000 1 0.00124
175000 1 0.00124
177000 1 0.00124
186000 1 0.00124
188000 1 0.00124
194000 1 0.00124
195000 1 0.00124
197000 1 0.00124
208000 1 0.00124
217000 1 0.00124
220000 1 0.00124
220000 1 0.00124
227000 1 0.00124
234000 1 0.00124
243000 1 0.00124
245000 1 0.00124
252000 1 0.00124
260000 1 0.00124
267000 1 0.00124
275000 1 0.00124
290000 1 0.00124
298000 1 0.00124
3e+05 1 0.00124
305000 1 0.00124
331000 1 0.00124
332000 1 0.00124
334000 1 0.00124
348000 1 0.00124

CL142 ----> CL84

image

No. of shared pairs: :161

CL142 ----> CL50

image

No. of shared pairs: :154

CL142 ----> CL859

image

No. of shared pairs: :13

CL142 ----> CL485

image

No. of shared pairs: :10

CL142 ----> CL1648

image

No. of shared pairs: :10