Cluster no. 143

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Cluster is part of supercluster: 19

Cluster characteristics:

size 10108
size_real 10108
ecount 74250
supercluster 19
annotations_summary
pair_completeness 0.625603087809585
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000296794618124258
satellite_probability 4.97759293480724e-22
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
38 210
51 2
11 1
14 1
59 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
38 279 0.12
200 76 0.0382
51 40 0.0101
78 39 0.0108
2 34 0.00514
30 17 0.00363
122 16 0.00681
68 12 0.00468
81 9 0.00269
7630 9 0.0077
2260 8 0.00682
17 7 0.00103
9 6 0.00161
25 6 0.00204
119 6 0.00355
733 6 0.00507
1870 6 0.0051
4970 6 0.00513
48 5 0.00116
74 5 0.00194
219 5 0.00342
1300 5 0.00425
1740 5 0.00424
5560 5 0.00428
3 4 0.000851
14 4 0.000904
16 4 0.0011
33 4 0.00164
84 4 0.0015
90 4 0.00114
134 4 0.00167
165 4 0.00172
242 4 0.00247
2180 4 0.00341
7920 4 0.00343
16700 4 0.00343
21600 4 0.00343
6 3 0.000617
7 3 0.000538
15 3 0.000867
21 3 0.000878
66 3 0.00077
86 3 0.000843
92 3 0.00171
100 3 0.00144
110 3 0.00149
114 3 0.00168
169 3 0.0016
181 3 0.00158
196 3 0.00136
214 3 0.00203
235 3 0.00167
247 3 0.00181
249 3 0.00213
290 3 0.00244
515 3 0.00248
2940 3 0.00256
5860 3 0.00257
6080 3 0.00257
6660 3 0.00257
14000 3 0.00257
32900 3 0.00257
40600 3 0.00257
40700 3 0.00257
64800 3 0.00257
72700 3 0.00257
1 2 0.000436
4 2 0.000445
10 2 0.000803
11 2 0.000434
29 2 0.000687
44 2 0.00049
45 2 0.000534
54 2 0.00094
55 2 0.000416
59 2 0.000901
61 2 0.000728
63 2 0.000491
77 2 0.000838
80 2 0.000809
85 2 0.000815
89 2 0.000819
93 2 0.00105
96 2 0.000938
99 2 0.0011
102 2 0.00058
108 2 0.00103
117 2 0.000866
151 2 0.000984
161 2 0.000816
163 2 0.000827
172 2 0.000867
189 2 0.000948
211 2 0.0012
251 2 0.0015
254 2 0.00154
288 2 0.00142
295 2 0.0015
335 2 0.00163
1300 2 0.0017
1510 2 0.0017
10100 2 0.00171
16800 2 0.00172
19100 2 0.00172
20800 2 0.00171
22600 2 0.00172
23100 2 0.00172
28600 2 0.00172
45300 2 0.00172
50500 2 0.00172
53400 2 0.00172
56700 2 0.00172
57800 2 0.00172
63600 2 0.00172
74400 2 0.00172
103000 2 0.00172
116000 2 0.00172
133000 2 0.00172
146000 2 0.00172
159000 2 0.00172
170000 2 0.00172
208000 2 0.00172
228000 2 0.00172
231000 2 0.00172
237000 2 0.00172
288000 2 0.00172
302000 2 0.00172
319000 2 0.00172
8 1 0.00037
12 1 0.000195
13 1 0.000388
22 1 0.000263
23 1 0.000291
24 1 0.000242
26 1 0.000316
28 1 0.000393
31 1 0.000165
32 1 0.000386
36 1 0.000376
40 1 0.000216
42 1 0.000344
46 1 0.000373
49 1 0.000357
50 1 0.000364
52 1 0.00034
56 1 0.000722
64 1 0.000496
65 1 0.000415
67 1 0.000307
69 1 0.000458
79 1 0.000285
83 1 0.000432
87 1 0.00041
88 1 0.000293
97 1 0.000373
105 1 0.000388
106 1 0.000396
107 1 0.000541
109 1 0.000544
111 1 0.000274
113 1 0.000413
115 1 0.000348
120 1 0.000412
123 1 0.000462
128 1 0.00054
130 1 0.000317
136 1 0.000576
138 1 0.000532
139 1 0.000447
141 1 0.00042
148 1 0.000458
155 1 0.000531
158 1 0.000476
159 1 0.000513
160 1 0.000502
170 1 0.000451
179 1 0.00057
182 1 0.000517
186 1 0.000414
188 1 0.000787
192 1 0.000785
202 1 0.00068
203 1 0.000587
207 1 0.000704
208 1 0.000642
213 1 0.000448
226 1 0.00073
229 1 0.000564
230 1 0.000758
241 1 0.000693
259 1 0.000729
262 1 0.000821
271 1 0.000791
275 1 0.000815
276 1 0.000646
283 1 0.000784
294 1 0.000755
319 1 0.000777
345 1 0.000764
355 1 0.000809
365 1 0.000808
372 1 0.000787
404 1 0.000836
427 1 0.000833
437 1 0.000817
623 1 0.000847
730 1 0.000839
818 1 0.000842
901 1 0.000855
1060 1 0.000847
1510 1 0.000851
1780 1 0.000847
2370 1 0.000854
2530 1 0.000855
2910 1 0.000854
3280 1 0.000855
3970 1 0.000855
4260 1 0.000857
4300 1 0.000854
5840 1 0.000857
6250 1 0.000856
6970 1 0.000856
7550 1 0.000856
10900 1 0.000858
10900 1 0.000858
11000 1 0.000857
11300 1 0.000857
11600 1 0.000858
12100 1 0.000858
12400 1 0.000857
13600 1 0.000858
15500 1 0.000858
17200 1 0.000858
17400 1 0.000857
19400 1 0.000858
24100 1 0.000858
24200 1 0.000859
24400 1 0.000858
24500 1 0.000858
25600 1 0.000858
25900 1 0.000857
26100 1 0.000857
27200 1 0.000857
28500 1 0.000857
29200 1 0.000857
29200 1 0.000858
29700 1 0.000858
30600 1 0.000858
31600 1 0.000858
32800 1 0.000858
33000 1 0.000858
35000 1 0.000858
35500 1 0.000858
36700 1 0.000858
37500 1 0.000858
37600 1 0.000858
40000 1 0.000858
42100 1 0.000858
42400 1 0.000858
43300 1 0.000858
46600 1 0.000858
46700 1 0.000859
48300 1 0.000859
49900 1 0.000859
50200 1 0.000859
50500 1 0.000858
50500 1 0.000858
51900 1 0.000858
53200 1 0.000858
53400 1 0.000858
53400 1 0.000858
56700 1 0.000858
57100 1 0.000859
58100 1 0.000858
59200 1 0.000859
60300 1 0.000859
60700 1 0.000858
61700 1 0.000858
61900 1 0.000859
66900 1 0.000858
67300 1 0.000858
67400 1 0.000858
67900 1 0.000859
69400 1 0.000859
71300 1 0.000859
71500 1 0.000858
71800 1 0.000859
72200 1 0.000858
72800 1 0.000859
73100 1 0.000859
76900 1 0.000858
77300 1 0.000858
77700 1 0.000858
79700 1 0.000859
81200 1 0.000859
82400 1 0.000859
84000 1 0.000859
91600 1 0.000858
95400 1 0.000858
95700 1 0.000858
99000 1 0.000858
111000 1 0.000858
115000 1 0.000858
119000 1 0.000858
120000 1 0.000858
123000 1 0.000858
132000 1 0.000858
138000 1 0.000858
138000 1 0.000858
139000 1 0.000858
144000 1 0.000858
146000 1 0.000858
149000 1 0.000858
154000 1 0.000858
157000 1 0.000858
162000 1 0.000858
177000 1 0.000858
179000 1 0.000858
202000 1 0.000858
209000 1 0.000858
210000 1 0.000858
211000 1 0.000858
215000 1 0.000858
226000 1 0.000858
234000 1 0.000858
236000 1 0.000858
237000 1 0.000858
241000 1 0.000858
245000 1 0.000858
254000 1 0.000858
269000 1 0.000858
271000 1 0.000858
272000 1 0.000858
275000 1 0.000858
275000 1 0.000858
276000 1 0.000858
278000 1 0.000858
290000 1 0.000858
291000 1 0.000858
298000 1 0.000858
302000 1 0.000858
305000 1 0.000858
306000 1 0.000858
313000 1 0.000858
323000 1 0.000858
323000 1 0.000858
333000 1 0.000858
338000 1 0.000858
339000 1 0.000858

CL143 ----> CL38

image

No. of shared pairs: :279

CL143 ----> CL200

image

No. of shared pairs: :76

CL143 ----> CL51

image

No. of shared pairs: :40

CL143 ----> CL78

image

No. of shared pairs: :39

CL143 ----> CL2

image

No. of shared pairs: :34

CL143 ----> CL30

image

No. of shared pairs: :17

CL143 ----> CL122

image

No. of shared pairs: :16

CL143 ----> CL68

image

No. of shared pairs: :12