Cluster no. 150

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Cluster is part of supercluster: 70

Cluster characteristics:

size 9555
size_real 9555
ecount 123359
supercluster 70
annotations_summary 0.03% organelle/plastid
0.02% organelle/mitochondria
pair_completeness 0.666376002790373
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.1854526425955
satellite_probability 1.26191127101533e-13
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
mitochondria mitochondria 2 0.00021
plastid plastid 3 0.00031

clusters with similarity:

Cluster Number of similarity hits
45 32
20 17
17 2
14 1
23 1
31 1
131 1
134 1
211 1
246 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
20 218 0.0507
45 209 0.059
17 19 0.00288
3480 10 0.0104
189 9 0.00473
9 7 0.00199
86 7 0.00209
23 6 0.00186
245 6 0.00386
2 5 0.00078
6 5 0.00107
31 5 0.000854
158 5 0.00264
7 4 0.000745
14 4 0.000949
16 4 0.00117
22 4 0.00111
66 4 0.00108
134 4 0.00183
213 4 0.00198
3 3 0.000668
19 3 0.00108
33 3 0.00135
44 3 0.000775
63 3 0.000776
74 3 0.00127
75 3 0.000776
90 3 0.000909
96 3 0.00156
120 3 0.00135
156 3 0.00169
187 3 0.00191
255 3 0.00215
2700 3 0.00311
3130 3 0.00312
3400 3 0.00311
6660 3 0.00313
15800 3 0.00313
32200 3 0.00313
4 2 0.000467
11 2 0.000454
15 2 0.000615
24 2 0.000509
29 2 0.00074
43 2 0.000576
46 2 0.000808
48 2 0.000487
54 2 0.00104
78 2 0.000589
79 2 0.000607
84 2 0.000812
89 2 0.000895
92 2 0.00129
102 2 0.000617
110 2 0.00111
111 2 0.00058
114 2 0.00127
122 2 0.000933
126 2 0.000969
130 2 0.000678
147 2 0.000567
148 2 0.00101
153 2 0.000898
169 2 0.0012
211 2 0.00137
365 2 0.00194
1510 2 0.00207
18700 2 0.00208
31000 2 0.00209
34700 2 0.00209
42500 2 0.00209
42700 2 0.00209
46100 2 0.00209
80500 2 0.00209
86900 2 0.00209
97400 2 0.00209
116000 2 0.00209
117000 2 0.00209
131000 2 0.00209
144000 2 0.00209
153000 2 0.00209
2e+05 2 0.00209
201000 2 0.00209
221000 2 0.00209
224000 2 0.00209
231000 2 0.00209
242000 2 0.00209
264000 2 0.00209
277000 2 0.00209
278000 2 0.00209
1 1 0.000228
5 1 0.000404
10 1 0.000438
13 1 0.000422
21 1 0.000311
25 1 0.000367
26 1 0.000338
27 1 0.000448
28 1 0.000428
30 1 0.000223
38 1 0.000473
39 1 0.000425
40 1 0.000226
47 1 0.000297
49 1 0.000385
50 1 0.000394
56 1 0.000849
57 1 0.000512
58 1 0.000568
59 1 0.000497
64 1 0.000552
69 1 0.000506
70 1 0.000559
72 1 0.000457
82 1 0.000524
83 1 0.000474
85 1 0.000445
88 1 0.000312
95 1 0.000531
97 1 0.000404
98 1 0.00055
99 1 0.000619
100 1 0.000535
103 1 0.000344
104 1 0.000568
106 1 0.000431
107 1 0.00061
112 1 0.000625
118 1 0.000576
121 1 0.000687
125 1 0.000593
127 1 0.000471
131 1 0.000824
139 1 0.000492
161 1 0.000446
163 1 0.000452
165 1 0.000473
167 1 0.000441
174 1 5e-04
176 1 0.000696
179 1 0.000647
181 1 0.000592
184 1 0.000737
186 1 0.000453
191 1 0.000533
192 1 0.000937
195 1 0.000758
197 1 0.00054
200 1 0.000561
201 1 0.000946
205 1 0.000633
217 1 0.000684
220 1 0.000745
223 1 0.000779
227 1 0.000796
229 1 0.000639
230 1 0.000899
232 1 0.000743
243 1 0.000647
244 1 0.00094
246 1 0.000964
250 1 0.000901
252 1 0.000816
261 1 0.000995
276 1 0.000746
282 1 0.000901
286 1 0.000759
291 1 0.000881
294 1 0.000896
321 1 0.000979
378 1 0.000961
688 1 0.00101
1440 1 0.00103
1500 1 0.00104
1730 1 0.00104
1970 1 0.00104
2720 1 0.00103
3460 1 0.00104
4330 1 0.00104
5070 1 0.00104
6250 1 0.00104
8270 1 0.00104
12200 1 0.00104
16300 1 0.00104
27000 1 0.00104
28800 1 0.00104
39200 1 0.00104
41800 1 0.00104
42300 1 0.00104
45800 1 0.00104
45900 1 0.00104
46800 1 0.00104
53700 1 0.00104
56000 1 0.00104
56500 1 0.00104
70500 1 0.00104
72000 1 0.00104
77600 1 0.00104
79200 1 0.00104
79300 1 0.00104
79500 1 0.00104
83800 1 0.00104
96900 1 0.00104
125000 1 0.00104
133000 1 0.00104
150000 1 0.00104
154000 1 0.00104
157000 1 0.00104
161000 1 0.00104
165000 1 0.00104
178000 1 0.00104
182000 1 0.00104
187000 1 0.00104
194000 1 0.00104
197000 1 0.00104
207000 1 0.00104
216000 1 0.00104
217000 1 0.00104
222000 1 0.00104
224000 1 0.00104
230000 1 0.00104
234000 1 0.00104
235000 1 0.00104
239000 1 0.00104
249000 1 0.00104
251000 1 0.00104
266000 1 0.00104
266000 1 0.00104
288000 1 0.00104
301000 1 0.00104
317000 1 0.00104
318000 1 0.00104
318000 1 0.00104
330000 1 0.00104
332000 1 0.00104

CL150 ----> CL20

image

No. of shared pairs: :218

CL150 ----> CL45

image

No. of shared pairs: :209

CL150 ----> CL17

image

No. of shared pairs: :19

CL150 ----> CL3481

image

No. of shared pairs: :10