Cluster no. 154

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Cluster is part of supercluster: 38

Cluster characteristics:

size 9329
size_real 9329
ecount 341616
supercluster 38
annotations_summary
pair_completeness 0.794383535295249
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000643155750884339
satellite_probability 3.20953330666128e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
35 715
169 467
109 43
42 24
67 12
138 1
181 1
282 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
169 178 0.142
42 79 0.0347
109 56 0.0463
1250 26 0.0473
17 7 0.00113
31 6 0.0011
33 6 0.00333
4050 6 0.011
7780 6 0.0111
3 5 0.00123
102 5 0.00177
6750 5 0.00927
4 4 0.00104
23 4 0.00143
74 4 0.00206
138 4 0.0032
5700 4 0.00743
5 3 0.00146
6 3 0.000709
22 3 0.000946
24 3 0.000854
29 3 0.00132
50 3 0.00142
61 3 0.00142
66 3 0.000918
68 3 0.00155
130 3 0.00119
30500 3 0.00559
51400 3 0.0056
53400 3 0.0056
2 2 0.000334
8 2 0.000965
9 2 0.000647
14 2 0.000527
19 2 0.000849
20 2 0.000516
21 2 0.000717
26 2 0.000788
32 2 0.00102
34 2 0.000707
43 2 0.000655
55 2 0.000479
67 2 0.000762
79 2 0.000696
97 2 0.000973
98 2 0.00143
114 2 0.00174
126 2 0.00122
134 2 0.00114
142 2 0.00149
151 2 0.00143
153 2 0.00111
191 2 0.00137
259 2 0.0027
2980 2 0.0037
6150 2 0.0037
7960 2 0.00372
8940 2 0.00372
9340 2 0.00372
13500 2 0.00372
27500 2 0.00372
33300 2 0.00373
62500 2 0.00373
95900 2 0.00373
102000 2 0.00373
105000 2 0.00373
115000 2 0.00373
172000 2 0.00373
181000 2 0.00373
185000 2 0.00373
208000 2 0.00373
218000 2 0.00373
254000 2 0.00373
272000 2 0.00373
274000 2 0.00373
285000 2 0.00373
291000 2 0.00373
306000 2 0.00373
309000 2 0.00373
331000 2 0.00373
1 1 0.000253
10 1 0.000537
11 1 0.000251
12 1 0.000223
13 1 0.000514
25 1 0.000434
27 1 0.000553
30 1 0.000247
35 1 0.000272
39 1 0.000518
41 1 0.000293
45 1 0.000321
46 1 0.000487
47 1 0.000339
52 1 0.000432
54 1 0.000667
57 1 0.000653
60 1 0.000638
62 1 0.000319
64 1 0.00072
65 1 0.000561
72 1 0.000567
73 1 0.00074
77 1 0.000569
80 1 0.000543
81 1 0.000368
85 1 0.000548
89 1 0.000552
91 1 0.000842
92 1 0.000885
93 1 0.000779
100 1 0.000691
101 1 0.000497
104 1 0.000747
106 1 0.000527
111 1 0.000331
112 1 0.000849
113 1 0.000559
116 1 0.000394
117 1 0.000595
118 1 0.00076
119 1 0.000941
127 1 0.000589
128 1 0.000818
129 1 0.000899
131 1 0.00126
133 1 0.00031
135 1 0.000678
136 1 0.000903
140 1 0.000411
141 1 0.000571
145 1 0.000522
155 1 0.000798
157 1 0.000774
158 1 0.000681
159 1 0.000758
170 1 0.000631
174 1 0.000633
189 1 0.000675
190 1 0.000782
192 1 0.00155
195 1 0.00112
201 1 0.00157
226 1 0.00135
238 1 0.00123
239 1 0.00119
245 1 0.000884
252 1 0.00124
256 1 0.0013
261 1 0.00171
264 1 0.00132
275 1 0.00167
277 1 0.0015
282 1 0.00145
286 1 0.00112
289 1 0.00158
303 1 0.00158
404 1 0.00176
513 1 0.00184
630 1 0.00176
887 1 0.0018
1270 1 0.00185
1680 1 0.00185
2110 1 0.00184
3000 1 0.00185
4450 1 0.00185
5470 1 0.00185
5980 1 0.00186
7550 1 0.00186
8800 1 0.00186
9670 1 0.00186
22900 1 0.00186
26600 1 0.00187
27700 1 0.00186
31400 1 0.00186
32900 1 0.00186
39300 1 0.00187
49200 1 0.00187
52500 1 0.00187
54200 1 0.00187
55100 1 0.00187
58300 1 0.00187
88700 1 0.00187
97100 1 0.00187
109000 1 0.00187
130000 1 0.00187
145000 1 0.00187
158000 1 0.00187
161000 1 0.00187
174000 1 0.00187
179000 1 0.00187
192000 1 0.00187
241000 1 0.00187
251000 1 0.00187
264000 1 0.00187
270000 1 0.00187
289000 1 0.00187
317000 1 0.00187
319000 1 0.00187

CL154 ----> CL169

image

No. of shared pairs: :178

CL154 ----> CL42

image

No. of shared pairs: :79

CL154 ----> CL109

image

No. of shared pairs: :56

CL154 ----> CL1247

image

No. of shared pairs: :26