Cluster no. 167

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Cluster is part of supercluster: 82

Cluster characteristics:

size 8273
size_real 8273
ecount 44893
supercluster 82
annotations_summary 0.01% organelle/plastid
pair_completeness 0.518817697815311
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000362625407953584
satellite_probability 2.0897667525813e-21
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 1 0.00012

clusters with similarity:

Cluster Number of similarity hits
24 31
17 2
4 1
30 1
49 1
96 1
100 1
148 1
174 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
24 286 0.0667
174 153 0.0649
17 11 0.00158
873 11 0.00826
505 10 0.00736
63 7 0.00166
48 6 0.00135
16 5 0.00133
20 5 0.00107
31 5 0.000805
40 5 0.00105
74 5 0.00184
102 5 0.00139
130 5 0.00151
169 5 0.00247
1130 5 0.00377
7 4 0.000699
14 4 0.000875
98 4 0.00184
189 4 0.00177
9570 4 0.00304
10800 4 0.00304
17700 4 0.00305
3 3 0.000619
22 3 0.00076
23 3 0.000838
45 3 0.00077
78 3 8e-04
97 3 0.00106
100 3 0.00135
134 3 0.00118
245 3 0.00157
276 3 0.00177
39500 3 0.00229
49100 3 0.00229
4 2 0.000431
5 2 0.000706
8 2 0.000702
9 2 0.000517
11 2 0.00042
19 2 0.000639
29 2 0.000654
30 2 0.000414
33 2 0.000775
51 2 0.000488
57 2 0.000867
61 2 0.000692
66 2 0.000495
67 2 0.000588
72 2 0.000787
87 2 0.000774
90 2 0.000547
96 2 0.000878
114 2 0.00104
119 2 0.00109
147 2 0.000515
148 2 0.000858
151 2 0.000918
152 2 0.000663
153 2 0.000775
178 2 0.00113
213 2 0.000841
3040 2 0.00152
9810 2 0.00152
27600 2 0.00152
33400 2 0.00152
38500 2 0.00152
48200 2 0.00152
50200 2 0.00152
52600 2 0.00152
52900 2 0.00152
60200 2 0.00152
65600 2 0.00152
73600 2 0.00152
78700 2 0.00152
85200 2 0.00152
94400 2 0.00152
99100 2 0.00152
108000 2 0.00152
114000 2 0.00152
116000 2 0.00152
122000 2 0.00152
129000 2 0.00152
134000 2 0.00152
144000 2 0.00152
150000 2 0.00152
167000 2 0.00152
192000 2 0.00152
198000 2 0.00152
222000 2 0.00152
223000 2 0.00152
225000 2 0.00152
255000 2 0.00152
255000 2 0.00152
256000 2 0.00152
257000 2 0.00152
264000 2 0.00152
294000 2 0.00152
305000 2 0.00152
308000 2 0.00152
329000 2 0.00152
336000 2 0.00152
1 1 0.000211
2 1 0.000148
6 1 2e-04
15 1 0.000277
18 1 0.000325
21 1 0.000281
27 1 0.000387
28 1 0.000372
41 1 0.000238
43 1 0.000261
44 1 0.000237
49 1 0.000339
50 1 0.000346
53 1 0.000244
58 1 0.000473
68 1 0.000369
69 1 0.000429
70 1 0.000467
71 1 0.000286
76 1 0.000382
82 1 0.000442
84 1 0.000355
86 1 0.00027
99 1 0.000508
104 1 0.000473
105 1 0.000367
111 1 0.000263
112 1 0.000512
120 1 0.000389
121 1 0.000552
129 1 0.00053
131 1 0.000638
140 1 0.000312
150 1 0.000441
155 1 0.000493
161 1 0.000385
168 1 0.00041
170 1 0.000423
172 1 0.000407
182 1 0.000481
184 1 0.000585
187 1 0.000519
191 1 0.000448
194 1 0.000672
197 1 0.000453
205 1 0.000517
207 1 0.000638
217 1 0.000551
218 1 0.00066
227 1 0.000621
233 1 0.000683
234 1 0.00068
235 1 0.000515
250 1 0.000683
260 1 0.000665
265 1 0.000698
267 1 0.000594
287 1 0.000719
288 1 0.000643
291 1 0.000671
365 1 0.000723
434 1 0.000721
449 1 0.000739
488 1 0.000751
567 1 0.000739
743 1 0.000755
824 1 0.000754
2310 1 0.000757
4230 1 0.000759
4700 1 0.00076
4890 1 0.000759
6370 1 0.000761
6750 1 0.00076
6760 1 0.000761
8100 1 0.000761
9320 1 0.000762
10000 1 0.00076
16900 1 0.000762
18000 1 0.000761
19500 1 0.000762
20700 1 0.000762
21300 1 0.000763
26700 1 0.000763
28400 1 0.000762
29100 1 0.000762
32400 1 0.000762
33700 1 0.000762
33800 1 0.000762
41300 1 0.000762
41400 1 0.000762
41800 1 0.000762
47100 1 0.000762
51000 1 0.000762
51600 1 0.000763
55600 1 0.000763
57800 1 0.000762
60000 1 0.000762
64900 1 0.000762
67500 1 0.000763
68400 1 0.000763
70000 1 0.000763
70100 1 0.000763
70400 1 0.000763
71000 1 0.000763
72500 1 0.000763
74900 1 0.000763
77900 1 0.000762
87500 1 0.000762
95100 1 0.000762
98100 1 0.000762
110000 1 0.000762
112000 1 0.000762
117000 1 0.000762
121000 1 0.000762
122000 1 0.000762
124000 1 0.000762
130000 1 0.000762
133000 1 0.000762
135000 1 0.000762
141000 1 0.000762
149000 1 0.000762
153000 1 0.000762
161000 1 0.000762
168000 1 0.000762
170000 1 0.000762
177000 1 0.000762
181000 1 0.000762
190000 1 0.000762
199000 1 0.000762
202000 1 0.000762
212000 1 0.000762
217000 1 0.000762
218000 1 0.000762
225000 1 0.000762
240000 1 0.000762
240000 1 0.000762
243000 1 0.000762
250000 1 0.000762
254000 1 0.000762
262000 1 0.000762
267000 1 0.000762
274000 1 0.000762
277000 1 0.000762
278000 1 0.000762
278000 1 0.000762
281000 1 0.000762
287000 1 0.000762
290000 1 0.000762
293000 1 0.000762
301000 1 0.000762
301000 1 0.000762
303000 1 0.000762
306000 1 0.000762
315000 1 0.000762
316000 1 0.000762
317000 1 0.000762
321000 1 0.000762
325000 1 0.000762
328000 1 0.000762
333000 1 0.000762

CL167 ----> CL24

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No. of shared pairs: :286

CL167 ----> CL174

image

No. of shared pairs: :153

CL167 ----> CL17

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No. of shared pairs: :11

CL167 ----> CL873

image

No. of shared pairs: :11

CL167 ----> CL505

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No. of shared pairs: :10