Cluster no. 171

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Cluster is part of supercluster: 84

Cluster characteristics:

size 7825
size_real 7825
ecount 44572
supercluster 84
annotations_summary
pair_completeness 0.650495676017718
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000383386581469649
satellite_probability 3.68527499034017e-22
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
16 36
59 31
160 20
148 2
19 1
102 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
16 198 0.0602
148 92 0.0497
160 80 0.0482
59 67 0.0356
790 14 0.0165
31 9 0.00157
4 8 0.00192
17 8 0.00124
1760 7 0.00832
2730 6 0.00718
9700 6 0.00721
22 5 0.00144
85 5 0.00236
1 4 0.000941
3 4 0.000916
7 4 0.000763
28 4 0.00181
48 4 0.00101
96 4 0.00223
97 4 0.0017
5320 4 0.0048
6070 4 0.00481
7880 4 0.0048
14900 4 0.00481
22700 4 0.00481
30900 4 0.00482
15 3 0.00096
29 3 0.00117
33 3 0.00143
46 3 0.00128
54 3 0.00167
63 3 0.000803
72 3 0.00146
98 3 0.00178
102 3 0.000964
130 3 0.00106
179 3 0.00212
191 3 0.00172
2070 3 0.00358
2170 3 0.00359
8420 3 0.0036
9800 3 0.0036
11900 3 0.00361
13900 3 0.00361
17500 3 0.00361
45300 3 0.00361
48200 3 0.00361
52400 3 0.00361
12 2 0.000418
13 2 0.000892
14 2 0.000489
23 2 0.000645
26 2 0.000706
27 2 0.000951
49 2 0.000811
62 2 0.000583
67 2 0.000686
68 2 0.000896
69 2 0.00108
99 2 0.00135
108 2 0.00124
114 2 0.00138
126 2 0.00103
129 2 0.00142
134 2 0.000974
153 2 0.000953
156 2 0.00121
164 2 0.00192
181 2 0.00128
206 2 0.00157
211 2 0.0015
520 2 0.00238
1000 2 0.00236
2610 2 0.00239
3600 2 0.0024
4180 2 0.0024
4850 2 0.0024
7140 2 0.0024
7660 2 0.0024
10300 2 0.0024
10800 2 0.0024
18800 2 0.00241
22300 2 0.00241
22700 2 0.00241
23700 2 0.00241
25000 2 0.00241
30000 2 0.00241
37900 2 0.00241
72900 2 0.00241
102000 2 0.00241
107000 2 0.00241
111000 2 0.00241
143000 2 0.00241
152000 2 0.00241
176000 2 0.00241
181000 2 0.00241
181000 2 0.00241
186000 2 0.00241
186000 2 0.00241
202000 2 0.00241
204000 2 0.00241
209000 2 0.00241
222000 2 0.00241
242000 2 0.00241
252000 2 0.00241
259000 2 0.00241
290000 2 0.00241
307000 2 0.00241
325000 2 0.00241
339000 2 0.00241
2 1 0.000159
5 1 0.000426
6 1 0.000221
9 1 0.000295
10 1 0.000464
11 1 0.000234
18 1 0.000386
20 1 0.00024
24 1 0.000263
32 1 0.000443
36 1 0.00043
37 1 0.00026
40 1 0.000233
43 1 0.000299
50 1 0.000415
52 1 0.000384
53 1 0.000276
55 1 0.000224
57 1 0.000548
60 1 0.000537
64 1 0.000595
65 1 0.000481
66 1 0.000281
73 1 0.000608
74 1 0.000447
76 1 0.000469
79 1 0.000316
80 1 0.000468
86 1 0.00031
87 1 0.000476
88 1 0.000325
90 1 0.000315
92 1 0.000702
93 1 0.000634
95 1 0.00057
100 1 0.000574
109 1 0.000665
110 1 0.000596
113 1 0.00048
115 1 0.000394
117 1 0.000507
119 1 0.000737
121 1 0.000753
127 1 0.000502
132 1 0.000641
135 1 0.000565
138 1 0.000648
139 1 0.000526
141 1 0.000489
147 1 0.000294
151 1 0.000589
155 1 0.000646
158 1 0.000567
161 1 0.000473
163 1 0.00048
176 1 0.000765
177 1 0.000794
182 1 0.000626
186 1 0.000481
187 1 0.000691
193 1 0.000785
197 1 0.00058
201 1 0.00108
208 1 0.000819
221 1 0.00094
222 1 0.000839
229 1 0.000696
232 1 0.000821
245 1 0.000702
247 1 0.000759
313 1 0.00105
338 1 0.00116
504 1 0.00118
578 1 0.00115
588 1 0.00116
617 1 0.00119
1300 1 0.00119
1560 1 0.00119
1680 1 0.0012
2910 1 0.00119
3980 1 0.0012
4950 1 0.0012
6160 1 0.0012
6950 1 0.0012
7340 1 0.0012
8980 1 0.0012
10100 1 0.0012
11300 1 0.0012
11800 1 0.0012
14700 1 0.0012
16600 1 0.0012
17600 1 0.00121
17900 1 0.0012
18100 1 0.00121
19200 1 0.0012
19500 1 0.0012
20300 1 0.0012
20800 1 0.0012
22800 1 0.0012
24900 1 0.0012
25100 1 0.00121
25300 1 0.0012
25300 1 0.0012
26200 1 0.0012
27500 1 0.0012
27600 1 0.0012
27900 1 0.0012
28900 1 0.0012
30800 1 0.00121
31600 1 0.00121
33100 1 0.0012
35400 1 0.00121
36000 1 0.00121
37300 1 0.0012
45300 1 0.0012
46300 1 0.0012
48400 1 0.0012
50100 1 0.00121
50800 1 0.00121
51500 1 0.00121
53800 1 0.0012
54600 1 0.0012
56100 1 0.0012
56200 1 0.0012
57000 1 0.00121
57400 1 0.0012
58400 1 0.0012
58500 1 0.00121
60500 1 0.0012
60700 1 0.00121
61800 1 0.0012
62500 1 0.00121
74200 1 0.00121
74300 1 0.00121
75400 1 0.0012
75500 1 0.0012
75500 1 0.00121
78400 1 0.0012
78500 1 0.0012
80100 1 0.00121
80400 1 0.00121
81300 1 0.0012
82800 1 0.0012
83400 1 0.0012
83500 1 0.0012
84600 1 0.0012
84900 1 0.00121
86300 1 0.00121
93900 1 0.00121
97400 1 0.00121
112000 1 0.00121
130000 1 0.00121
144000 1 0.00121
151000 1 0.00121
151000 1 0.00121
155000 1 0.00121
157000 1 0.00121
167000 1 0.00121
168000 1 0.00121
171000 1 0.00121
197000 1 0.00121
203000 1 0.00121
204000 1 0.00121
205000 1 0.00121
207000 1 0.00121
207000 1 0.00121
218000 1 0.00121
225000 1 0.00121
229000 1 0.00121
232000 1 0.00121
239000 1 0.00121
242000 1 0.00121
242000 1 0.00121
250000 1 0.00121
258000 1 0.00121
258000 1 0.00121
265000 1 0.00121
269000 1 0.00121
271000 1 0.00121
279000 1 0.00121
280000 1 0.00121
283000 1 0.00121
298000 1 0.00121
334000 1 0.00121
336000 1 0.00121
342000 1 0.00121
346000 1 0.00121

CL171 ----> CL16

image

No. of shared pairs: :198

CL171 ----> CL148

image

No. of shared pairs: :92

CL171 ----> CL160

image

No. of shared pairs: :80

CL171 ----> CL59

image

No. of shared pairs: :67

CL171 ----> CL790

image

No. of shared pairs: :14