Cluster no. 195

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Cluster is part of supercluster: 100

Cluster characteristics:

size 5968
size_real 5968
ecount 78984
supercluster 100
annotations_summary
pair_completeness 0.783622235505081
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0570079271377973
satellite_probability 2.61754876628529e-19
consensus None
TAREAN_annotation Other
orientation_score 0.999541467064062

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
31 2
37 1
158 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
17 11 0.00183
3800 8 0.0217
3 6 0.00154
291 6 0.0111
1640 6 0.0161
2790 6 0.0163
7 5 0.00105
48 4 0.00114
7980 4 0.0109
4 3 0.000813
15 3 0.00113
24 3 0.000899
26 3 0.00127
30 3 0.000773
98 3 0.00245
126 3 0.00204
169 3 0.00279
170 3 0.00212
198 3 0.00392
738 3 0.00803
2 2 0.000344
12 2 0.000463
20 2 0.00054
22 2 0.000667
29 2 0.000949
31 2 0.00038
50 2 0.00103
59 2 0.00141
74 2 0.00113
85 2 0.00121
89 2 0.00122
95 2 0.00155
99 2 0.00196
110 2 0.00165
123 2 0.00147
139 2 0.00139
145 2 0.00115
146 2 0.00185
152 2 0.000966
168 2 0.00134
172 2 0.00133
181 2 0.00183
186 2 0.00124
196 2 0.00143
213 2 0.0014
250 2 0.00388
436 2 0.00527
2130 2 0.00539
7120 2 0.00547
41600 2 0.00551
59600 2 0.0055
91800 2 0.00551
189000 2 0.00551
220000 2 0.00551
232000 2 0.00551
288000 2 0.00551
323000 2 0.00551
332000 2 0.00551
6 1 0.000246
8 1 0.000526
10 1 0.000592
11 1 0.000262
16 1 0.000354
19 1 0.000458
23 1 0.00038
25 1 0.000469
28 1 0.000575
32 1 0.000559
33 1 0.000613
35 1 0.000286
36 1 0.000538
37 1 0.000295
49 1 5e-04
51 1 0.000318
53 1 0.000317
55 1 0.00025
56 1 0.00171
58 1 0.000858
61 1 0.000515
67 1 0.000408
69 1 0.000723
70 1 0.000838
86 1 0.000363
87 1 0.000611
88 1 0.000383
96 1 0.000752
101 1 0.000543
104 1 0.000857
105 1 0.000563
107 1 0.000957
108 1 0.000873
112 1 0.000995
113 1 0.000619
115 1 0.000483
117 1 0.000664
120 1 0.000616
129 1 0.00106
130 1 0.000424
133 1 0.000327
144 1 0.00117
150 1 0.000758
151 1 0.000813
154 1 0.00112
156 1 0.000846
157 1 0.000894
158 1 0.000771
162 1 0.000661
191 1 0.00078
202 1 0.00149
206 1 0.00123
207 1 0.00162
208 1 0.00133
216 1 0.00159
226 1 0.00176
232 1 0.00133
235 1 0.00101
238 1 0.00156
241 1 0.00156
245 1 0.00104
273 1 0.00127
345 1 0.00197
428 1 0.00268
561 1 0.00265
659 1 0.00255
760 1 0.00261
1030 1 0.00267
1460 1 0.00268
1950 1 0.0027
3780 1 0.00273
3810 1 0.00272
4800 1 0.00274
5460 1 0.00274
6050 1 0.00274
6990 1 0.00274
7000 1 0.00273
7280 1 0.00274
8130 1 0.00274
13000 1 0.00274
13400 1 0.00275
13900 1 0.00274
19000 1 0.00274
21400 1 0.00274
24800 1 0.00274
25400 1 0.00275
34800 1 0.00275
38400 1 0.00275
40600 1 0.00275
58600 1 0.00275
81000 1 0.00275
82600 1 0.00275
82900 1 0.00276
105000 1 0.00275
109000 1 0.00275
137000 1 0.00275
160000 1 0.00275
188000 1 0.00275
205000 1 0.00275
241000 1 0.00275
260000 1 0.00275
272000 1 0.00275
277000 1 0.00275
278000 1 0.00275

CL195 ----> CL17

image

No. of shared pairs: :11