Cluster no. 198

Go back to cluster table

Cluster is part of supercluster: 102

Cluster characteristics:

size 5757
size_real 5757
ecount 48874
supercluster 102
annotations_summary
pair_completeness 0.754647973178909
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.497133923918708
satellite_probability 1.64198197326955e-05
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
94 6
166 4
98 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
166 18 0.0169
4890 6 0.0147
4960 5 0.0123
15400 5 0.0123
51 4 0.00125
61 4 0.00202
9760 4 0.00985
36200 4 0.00989
7 3 0.000623
22 3 0.000987
33 3 0.0018
48 3 0.000845
94 3 0.00431
118 3 0.00254
162 3 0.00193
195 3 0.00392
213 3 0.00204
2560 3 0.00735
10100 3 0.00739
19700 3 0.0074
40900 3 0.00742
42200 3 0.00742
2 2 0.000342
3 2 0.000508
5 2 0.00104
6 2 0.000488
14 2 0.000546
17 2 0.000331
54 2 0.00146
64 2 0.00159
82 2 0.00147
88 2 0.000754
98 2 0.00158
114 2 0.00196
120 2 0.0012
130 2 0.000834
168 2 0.00131
243 2 0.00202
8890 2 0.00491
13500 2 0.00493
16100 2 0.00493
17200 2 0.00494
17200 2 0.00496
18600 2 0.00493
22000 2 0.00494
22500 2 0.00495
23400 2 0.00494
25600 2 0.00495
29400 2 0.00494
34900 2 0.00494
41000 2 0.00496
42200 2 0.00494
55200 2 0.00495
101000 2 0.00496
118000 2 0.00496
139000 2 0.00496
292000 2 0.00496
294000 2 0.00496
3e+05 2 0.00496
318000 2 0.00496
335000 2 0.00496
1 1 0.000261
4 1 0.000268
9 1 0.000338
12 1 0.000229
16 1 0.000349
18 1 0.000462
20 1 0.000267
27 1 0.000596
30 1 0.000255
32 1 0.000547
38 1 0.000641
39 1 0.000556
41 1 0.000304
45 1 0.000335
49 1 0.00049
50 1 0.000504
52 1 0.000458
53 1 0.000313
59 1 0.000686
63 1 0.000302
66 1 0.000319
67 1 0.000401
68 1 0.000554
74 1 0.000552
76 1 0.000586
84 1 0.000523
85 1 0.000591
87 1 0.000597
102 1 0.000372
104 1 0.000829
116 1 0.000415
127 1 0.000638
129 1 0.00102
132 1 0.000883
135 1 0.000744
137 1 0.000757
142 1 0.000829
144 1 0.00112
151 1 0.000787
156 1 0.000818
170 1 0.000688
179 1 0.00101
181 1 0.00088
182 1 0.000853
194 1 0.00173
210 1 0.00181
215 1 0.00126
219 1 0.00143
245 1 0.001
251 1 0.00174
255 1 0.00119
257 1 0.0019
276 1 0.00127
287 1 0.00207
299 1 0.00221
345 1 0.00183
721 1 0.00232
862 1 0.00236
1040 1 0.00236
1100 1 0.0024
1680 1 0.0024
1880 1 0.00244
1910 1 0.00245
1960 1 0.00243
2040 1 0.00243
2080 1 0.00246
2320 1 0.00245
2560 1 0.00244
2700 1 0.00247
3370 1 0.00246
4330 1 0.00244
5170 1 0.00246
5320 1 0.00245
5570 1 0.00246
6820 1 0.00246
8750 1 0.00245
8860 1 0.00248
11100 1 0.00247
11300 1 0.00247
11800 1 0.00247
13600 1 0.00246
14400 1 0.00247
15200 1 0.00246
16400 1 0.00247
16700 1 0.00247
17300 1 0.00247
20100 1 0.00247
20500 1 0.00247
20800 1 0.00247
20800 1 0.00247
21000 1 0.00247
24300 1 0.00247
24800 1 0.00248
27900 1 0.00248
28700 1 0.00247
28900 1 0.00248
30100 1 0.00247
30300 1 0.00248
31500 1 0.00247
34100 1 0.00248
37200 1 0.00248
37800 1 0.00247
43500 1 0.00247
44500 1 0.00248
44900 1 0.00247
45300 1 0.00248
48500 1 0.00248
53500 1 0.00248
54600 1 0.00248
57000 1 0.00248
58200 1 0.00248
60000 1 0.00248
62800 1 0.00248
65000 1 0.00248
65500 1 0.00248
66400 1 0.00248
67200 1 0.00248
67800 1 0.00248
72600 1 0.00248
74800 1 0.00248
75700 1 0.00248
78500 1 0.00248
78700 1 0.00248
79700 1 0.00248
81800 1 0.00248
85100 1 0.00248
93700 1 0.00248
98900 1 0.00248
101000 1 0.00248
104000 1 0.00248
109000 1 0.00248
110000 1 0.00248
112000 1 0.00248
112000 1 0.00248
115000 1 0.00248
122000 1 0.00248
137000 1 0.00248
141000 1 0.00248
142000 1 0.00248
144000 1 0.00248
148000 1 0.00248
152000 1 0.00248
152000 1 0.00248
155000 1 0.00248
168000 1 0.00248
184000 1 0.00248
186000 1 0.00248
195000 1 0.00248
197000 1 0.00248
199000 1 0.00248
210000 1 0.00248
213000 1 0.00248
216000 1 0.00248
216000 1 0.00248
221000 1 0.00248
232000 1 0.00248
238000 1 0.00248
243000 1 0.00248
252000 1 0.00248
254000 1 0.00248
255000 1 0.00248
294000 1 0.00248
318000 1 0.00248
325000 1 0.00248
326000 1 0.00248
336000 1 0.00248
339000 1 0.00248
340000 1 0.00248

CL198 ----> CL166

image

No. of shared pairs: :18