Cluster no. 200

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Cluster is part of supercluster: 19

Cluster characteristics:

size 5540
size_real 5540
ecount 48967
supercluster 19
annotations_summary
pair_completeness 0.540172365860439
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000541516245487365
satellite_probability 1.65508917325132e-21
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
38 235
51 3
2 1
17 1
30 1
68 1
78 1
110 1
122 1
163 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
38 230 0.116
143 76 0.0382
51 25 0.00692
78 18 0.00551
30 16 0.00368
2 14 0.00223
122 14 0.00695
81 11 0.00366
2610 9 0.0108
515 8 0.00917
68 7 0.00314
161 6 0.00284
4300 6 0.0072
173 5 0.00382
90 4 0.00126
1540 4 0.00479
2820 4 0.0048
7360 4 0.00482
7 3 0.000572
17 3 0.000464
22 3 0.000866
66 3 0.000843
120 3 0.00144
134 3 0.00146
288 3 0.0028
8020 3 0.00361
28600 3 0.00362
52000 3 0.00362
6 2 0.000442
11 2 0.000468
14 2 0.000489
20 2 0.00048
26 2 0.000707
40 2 0.000466
48 2 0.000503
49 2 0.000811
96 2 0.00111
119 2 0.00148
126 2 0.00103
151 2 0.00118
152 2 0.000789
242 2 0.00156
255 2 0.00158
295 2 0.00202
7550 2 0.00241
10300 2 0.00241
18200 2 0.00241
18700 2 0.00241
19900 2 0.00241
23200 2 0.00241
38300 2 0.00241
48600 2 0.00241
68100 2 0.00241
94300 2 0.00242
117000 2 0.00242
125000 2 0.00242
131000 2 0.00242
142000 2 0.00242
146000 2 0.00242
184000 2 0.00242
221000 2 0.00242
258000 2 0.00242
265000 2 0.00242
277000 2 0.00242
1 1 0.000235
4 1 0.000241
5 1 0.000426
8 1 0.000423
9 1 0.000295
13 1 0.000447
15 1 0.00032
24 1 0.000263
25 1 0.000385
29 1 0.000389
33 1 0.000477
34 1 0.00032
36 1 0.00043
37 1 0.00026
44 1 0.000267
46 1 0.000426
55 1 0.000224
58 1 0.000613
63 1 0.000268
80 1 0.000468
84 1 0.000428
94 1 0.000892
104 1 0.000613
108 1 0.000621
110 1 0.000597
112 1 0.00068
114 1 0.000692
116 1 0.000353
130 1 0.000354
132 1 0.000642
133 1 0.000284
135 1 0.000565
136 1 0.000715
140 1 0.000367
142 1 0.000613
144 1 0.000758
145 1 0.000453
148 1 0.000541
149 1 0.000672
150 1 0.000561
155 1 0.000647
163 1 0.00048
166 1 0.000671
169 1 0.000649
170 1 0.000532
172 1 0.000507
181 1 0.000641
183 1 0.000631
184 1 0.000815
189 1 0.000564
191 1 0.000572
199 1 0.000917
205 1 0.00069
214 1 0.000879
217 1 0.00075
223 1 0.000867
224 1 0.0011
232 1 0.000822
247 1 0.00076
251 1 0.001
253 1 0.000833
254 1 0.00104
260 1 0.000979
276 1 0.000825
316 1 0.00111
332 1 0.00109
402 1 0.00117
504 1 0.00118
620 1 0.00118
892 1 0.00118
1220 1 0.00119
1270 1 0.00119
1390 1 0.0012
1620 1 0.00119
1740 1 0.00119
3140 1 0.0012
3580 1 0.0012
4200 1 0.0012
4970 1 0.0012
5350 1 0.0012
5620 1 0.0012
6100 1 0.0012
6690 1 0.00121
7080 1 0.0012
8060 1 0.0012
9340 1 0.0012
12500 1 0.0012
14400 1 0.00121
15500 1 0.0012
17200 1 0.00121
18200 1 0.00121
19700 1 0.00121
19700 1 0.00121
20300 1 0.00121
21900 1 0.00121
22200 1 0.00121
23400 1 0.00121
24500 1 0.00121
25800 1 0.00121
25900 1 0.00121
25900 1 0.00121
28100 1 0.00121
29900 1 0.00121
43300 1 0.00121
44300 1 0.00121
50500 1 0.00121
57700 1 0.00121
60200 1 0.00121
61300 1 0.00121
66900 1 0.00121
67300 1 0.00121
68400 1 0.00121
68900 1 0.00121
69100 1 0.00121
69300 1 0.00121
69900 1 0.00121
72500 1 0.00121
73200 1 0.00121
77500 1 0.00121
77600 1 0.00121
80800 1 0.00121
89800 1 0.00121
96900 1 0.00121
101000 1 0.00121
103000 1 0.00121
103000 1 0.00121
116000 1 0.00121
140000 1 0.00121
147000 1 0.00121
149000 1 0.00121
171000 1 0.00121
178000 1 0.00121
192000 1 0.00121
204000 1 0.00121
207000 1 0.00121
208000 1 0.00121
209000 1 0.00121
213000 1 0.00121
215000 1 0.00121
219000 1 0.00121
224000 1 0.00121
226000 1 0.00121
232000 1 0.00121
245000 1 0.00121
250000 1 0.00121
252000 1 0.00121
252000 1 0.00121
265000 1 0.00121
267000 1 0.00121
269000 1 0.00121
270000 1 0.00121
272000 1 0.00121
279000 1 0.00121
283000 1 0.00121
284000 1 0.00121
288000 1 0.00121
292000 1 0.00121
301000 1 0.00121
302000 1 0.00121
312000 1 0.00121
323000 1 0.00121
328000 1 0.00121
338000 1 0.00121
343000 1 0.00121
345000 1 0.00121
347000 1 0.00121

CL200 ----> CL38

image

No. of shared pairs: :230

CL200 ----> CL143

image

No. of shared pairs: :76

CL200 ----> CL51

image

No. of shared pairs: :25

CL200 ----> CL78

image

No. of shared pairs: :18

CL200 ----> CL30

image

No. of shared pairs: :16

CL200 ----> CL2

image

No. of shared pairs: :14

CL200 ----> CL122

image

No. of shared pairs: :14

CL200 ----> CL81

image

No. of shared pairs: :11