Cluster no. 203

Go back to cluster table

Cluster is part of supercluster: 106

Cluster characteristics:

size 5352
size_real 5352
ecount 47573
supercluster 106
annotations_summary
pair_completeness 0.663661796705005
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000747663551401869
satellite_probability 3.15659983381055e-22
consensus None
TAREAN_annotation Other
orientation_score 0.999978985857482

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
6 1
17 1
30 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
213 43 0.0267
17 8 0.00129
2990 7 0.0127
41 4 0.00117
118 4 0.00303
1230 4 0.0072
1900 4 0.00731
3600 4 0.00732
4600 4 0.00734
17200 4 0.00735
2 3 0.000501
6 3 0.000708
22 3 0.000944
48 3 0.000813
84 3 0.00146
86 3 0.00102
123 3 0.00194
2230 3 0.00548
5750 3 0.00551
25200 3 0.00552
26600 3 0.00552
50700 3 0.00553
71200 3 0.00553
73300 3 0.00553
1 2 0.000504
3 2 0.000491
4 2 0.000517
8 2 0.000962
18 2 0.000868
23 2 0.000711
29 2 0.000874
54 2 0.00133
70 2 0.00146
74 2 0.00103
89 2 0.0011
94 2 0.0024
128 2 0.00163
138 2 0.00159
141 2 0.00114
226 2 0.00268
2880 2 0.00365
4090 2 0.00368
5560 2 0.00367
5860 2 0.00367
14600 2 0.00367
16600 2 0.00368
16800 2 0.00368
18600 2 0.00368
20100 2 0.00368
22800 2 0.00369
23700 2 0.00369
38800 2 0.00369
77100 2 0.00369
83200 2 0.00369
98300 2 0.00369
111000 2 0.00369
115000 2 0.00369
150000 2 0.00369
164000 2 0.00369
165000 2 0.00369
169000 2 0.00369
207000 2 0.00369
213000 2 0.00369
219000 2 0.00369
224000 2 0.00369
242000 2 0.00369
246000 2 0.00369
264000 2 0.00369
286000 2 0.00369
315000 2 0.00369
318000 2 0.00369
330000 2 0.00369
334000 2 0.00369
9 1 0.000323
11 1 0.000251
12 1 0.000222
13 1 0.000512
14 1 0.000263
16 1 0.000333
19 1 0.000423
32 1 0.000508
33 1 0.000553
40 1 0.00025
42 1 0.000438
43 1 0.000327
45 1 0.00032
49 1 0.000459
53 1 3e-04
56 1 0.00131
59 1 0.000626
60 1 0.000635
61 1 0.000471
62 1 0.000318
65 1 0.000559
66 1 0.000305
68 1 0.000515
78 1 0.000335
85 1 0.000546
93 1 0.000775
96 1 0.000662
99 1 0.000834
100 1 0.000688
113 1 0.000557
117 1 0.000593
119 1 0.000935
127 1 0.000586
142 1 0.000743
143 1 0.000587
148 1 0.00064
149 1 0.000831
151 1 0.00071
162 1 0.000591
165 1 0.000588
170 1 0.000628
177 1 0.00103
185 1 0.00076
186 1 0.000559
208 1 0.00107
215 1 0.00108
222 1 0.00111
229 1 0.000871
238 1 0.00122
245 1 0.000879
258 1 0.000943
261 1 0.00169
284 1 0.0014
318 1 0.00138
402 1 0.00176
475 1 0.00181
935 1 0.0018
1230 1 0.00183
1940 1 0.00182
3550 1 0.00183
4670 1 0.00183
5190 1 0.00183
5310 1 0.00184
5980 1 0.00183
8380 1 0.00184
10100 1 0.00184
10800 1 0.00184
11300 1 0.00184
12700 1 0.00184
14300 1 0.00184
14400 1 0.00184
14800 1 0.00184
15000 1 0.00184
16000 1 0.00184
16300 1 0.00184
16600 1 0.00185
18300 1 0.00184
19400 1 0.00184
19700 1 0.00184
21200 1 0.00185
21200 1 0.00184
22100 1 0.00184
22700 1 0.00184
22900 1 0.00184
23000 1 0.00184
23500 1 0.00184
26000 1 0.00184
27100 1 0.00184
29400 1 0.00185
30100 1 0.00184
35800 1 0.00184
38500 1 0.00185
40100 1 0.00185
40400 1 0.00185
40500 1 0.00185
42500 1 0.00185
43400 1 0.00185
44300 1 0.00185
46000 1 0.00185
46900 1 0.00184
46900 1 0.00184
48400 1 0.00184
49100 1 0.00185
50900 1 0.00184
51700 1 0.00185
51800 1 0.00184
52300 1 0.00185
52500 1 0.00184
54100 1 0.00185
54200 1 0.00185
54300 1 0.00185
56100 1 0.00184
58500 1 0.00185
61800 1 0.00185
62300 1 0.00184
62300 1 0.00185
64200 1 0.00185
65300 1 0.00184
65800 1 0.00185
71500 1 0.00185
76500 1 0.00185
76900 1 0.00185
77700 1 0.00184
79400 1 0.00185
81500 1 0.00184
81900 1 0.00184
97500 1 0.00185
102000 1 0.00185
104000 1 0.00185
127000 1 0.00185
129000 1 0.00185
149000 1 0.00185
154000 1 0.00185
158000 1 0.00185
159000 1 0.00185
160000 1 0.00185
177000 1 0.00185
185000 1 0.00185
188000 1 0.00185
189000 1 0.00185
201000 1 0.00185
201000 1 0.00185
202000 1 0.00185
205000 1 0.00185
212000 1 0.00185
213000 1 0.00185
215000 1 0.00185
215000 1 0.00185
220000 1 0.00185
231000 1 0.00185
231000 1 0.00185
244000 1 0.00185
245000 1 0.00185
256000 1 0.00185
257000 1 0.00185
258000 1 0.00185
259000 1 0.00185
261000 1 0.00185
261000 1 0.00185
263000 1 0.00185
263000 1 0.00185
264000 1 0.00185
264000 1 0.00185
265000 1 0.00185
267000 1 0.00185
270000 1 0.00185
271000 1 0.00185
276000 1 0.00185
282000 1 0.00185
282000 1 0.00185
284000 1 0.00185
285000 1 0.00185
288000 1 0.00185
294000 1 0.00185
308000 1 0.00185
310000 1 0.00185
312000 1 0.00185
326000 1 0.00185
329000 1 0.00185
329000 1 0.00185
331000 1 0.00185
334000 1 0.00185
335000 1 0.00185
346000 1 0.00185
346000 1 0.00185
347000 1 0.00185
348000 1 0.00185
348000 1 0.00185

CL203 ----> CL213

image

No. of shared pairs: :43