Cluster no. 207

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Cluster is part of supercluster: 109

Cluster characteristics:

size 5168
size_real 5168
ecount 43370
supercluster 109
annotations_summary
pair_completeness 0.819718309859155
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0919361121932217
satellite_probability 3.14463298280307e-18
consensus None
TAREAN_annotation Other
orientation_score 0.999246970768774

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
38 30
44 11
170 9
128 1
245 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
38 24 0.017
1350 16 0.0598
44 15 0.00473
170 14 0.0107
128 7 0.00742
1270 5 0.0187
5020 5 0.0191
118 4 0.00386
138 4 0.00412
1120 4 0.0153
2940 4 0.0154
17100 4 0.0154
18 3 0.00149
45 3 0.00106
553 3 0.0109
1020 3 0.0109
3490 3 0.0115
5180 3 0.0115
7120 3 0.0116
9570 3 0.0116
17700 3 0.0116
22900 3 0.0116
45100 3 0.0116
50200 3 0.0117
57100 3 0.0117
70200 3 0.0117
79600 3 0.0117
6 2 0.000506
27 2 0.00131
39 2 0.00121
61 2 0.00109
66 2 0.000669
87 2 0.00131
112 2 0.00222
115 2 0.00102
3450 2 0.00772
3920 2 0.00763
4170 2 0.00771
8720 2 0.00775
9110 2 0.00772
14300 2 0.00774
22600 2 0.00777
23400 2 0.00777
29900 2 0.00775
30500 2 0.00775
32000 2 0.00778
34500 2 0.00775
44900 2 0.00778
77200 2 0.00777
144000 2 0.00778
158000 2 0.00778
172000 2 0.00778
206000 2 0.00778
218000 2 0.00778
283000 2 0.00778
339000 2 0.00778
349000 2 0.00778
1 1 0.000272
3 1 0.000264
5 1 0.000563
14 1 0.000284
23 1 0.000396
26 1 0.000443
31 1 0.000194
32 1 0.000594
41 1 0.000319
42 1 5e-04
46 1 0.000564
48 1 0.000294
52 1 0.000491
54 1 0.00082
57 1 0.000798
67 1 0.000427
86 1 0.000377
92 1 0.00117
99 1 0.00109
101 1 0.000576
127 1 0.000704
130 1 0.000444
132 1 0.00101
134 1 0.000675
143 1 0.000704
156 1 0.000929
160 1 0.000921
165 1 0.000707
166 1 0.00109
167 1 0.000638
177 1 0.00145
178 1 0.0014
188 1 0.00276
195 1 0.00162
205 1 0.00114
209 1 0.00219
213 1 0.000756
245 1 0.00117
253 1 0.00159
305 1 0.00336
313 1 0.00264
389 1 0.00304
464 1 0.00337
966 1 0.00371
2990 1 0.00385
3040 1 0.00386
3490 1 0.00377
8670 1 0.00389
8710 1 0.00386
11800 1 0.00389
14000 1 0.00387
14700 1 0.00387
15400 1 0.00387
15500 1 0.00388
16900 1 0.00389
25600 1 0.00388
26400 1 0.00387
27700 1 0.00388
28400 1 0.00387
31200 1 0.00389
33100 1 0.00389
35900 1 0.00388
41000 1 0.00389
41900 1 0.00389
43900 1 0.00388
44300 1 0.00389
45700 1 0.0039
51600 1 0.00388
54000 1 0.0039
54400 1 0.00388
56200 1 0.0039
60800 1 0.0039
68800 1 0.00388
71700 1 0.0039
80600 1 0.00388
81900 1 0.0039
98900 1 0.00389
103000 1 0.00389
133000 1 0.00389
133000 1 0.00389
166000 1 0.00389
181000 1 0.00389
183000 1 0.00389
225000 1 0.00389
229000 1 0.00389
233000 1 0.00389
240000 1 0.00389
246000 1 0.00389
258000 1 0.00389
318000 1 0.00389
336000 1 0.00389

CL207 ----> CL38

image

No. of shared pairs: :24

CL207 ----> CL1349

image

No. of shared pairs: :16

CL207 ----> CL44

image

No. of shared pairs: :15

CL207 ----> CL170

image

No. of shared pairs: :14