Cluster no. 214

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Cluster is part of supercluster: 113

Cluster characteristics:

size 4827
size_real 4827
ecount 64175
supercluster 113
annotations_summary 22.19% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.02% organelle/plastid
pair_completeness 0.772026431718062
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00331468821214005
satellite_probability 4.71413703996316e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 1 0.00021
hAT hAT-TPase hAT hAT-TPase 1071 0.22188

clusters with similarity:

Cluster Number of similarity hits
122 7
119 1
251 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
122 52 0.0347
51 11 0.00355
30 9 0.00235
1030 8 0.0247
2 7 0.00121
68 5 0.00292
78 5 0.00182
215 5 0.00715
384 5 0.0149
119 4 0.00477
18500 4 0.0128
43600 4 0.0128
24 3 0.000913
138 3 0.00293
143 3 0.00203
173 3 0.00379
242 3 0.00391
1120 3 0.00951
30300 3 0.0096
56000 3 0.00962
1 2 0.000535
9 2 0.000697
15 2 0.000767
25 2 0.000961
26 2 0.000864
48 2 0.000578
49 2 0.00103
81 2 0.000803
83 2 0.00137
120 2 0.00127
251 2 0.00415
301 2 0.00481
2260 2 0.00627
4770 2 0.00629
4840 2 0.00633
8550 2 0.00638
9720 2 0.00637
10900 2 0.00638
19100 2 0.0064
36500 2 0.00642
52500 2 0.00641
61800 2 0.00641
73300 2 0.00641
116000 2 0.00642
155000 2 0.00642
171000 2 0.00642
306000 2 0.00642
3 1 0.00026
4 1 0.000275
5 1 0.000546
6 1 0.00025
17 1 0.000168
19 1 0.000469
20 1 0.000274
21 1 0.00039
33 1 0.000633
37 1 3e-04
38 1 0.000681
39 1 0.000586
40 1 0.000265
44 1 0.00031
50 1 0.000529
53 1 0.000322
56 1 0.00188
60 1 0.000744
62 1 0.000343
63 1 0.000311
72 1 0.000649
75 1 0.000311
77 1 0.000652
85 1 0.000625
87 1 0.000631
89 1 0.000629
90 1 0.000377
92 1 0.0011
95 1 0.000808
96 1 0.000782
100 1 0.000817
103 1 0.000443
109 1 0.00101
110 1 0.000863
111 1 0.000357
113 1 0.000639
124 1 0.000846
130 1 0.000434
132 1 0.000961
133 1 0.000333
137 1 0.000814
149 1 0.00103
153 1 0.000632
155 1 0.000971
161 1 0.000627
163 1 0.000639
165 1 0.000681
170 1 0.000734
185 1 0.000921
188 1 0.0024
189 1 0.000796
200 1 0.000879
231 1 0.00202
233 1 0.00216
236 1 0.00276
246 1 0.00256
271 1 0.00244
290 1 0.00267
294 1 0.00213
298 1 0.0027
312 1 0.00308
332 1 0.00248
345 1 0.0022
352 1 0.00215
404 1 0.00292
460 1 0.00277
688 1 0.00288
1100 1 0.00306
1110 1 0.00313
1190 1 0.00305
1780 1 0.00306
2230 1 0.00314
3900 1 0.00315
7940 1 0.00318
9210 1 0.00318
9950 1 0.00319
12800 1 0.00318
13700 1 0.00319
15600 1 0.00319
15900 1 0.00321
19100 1 0.0032
20400 1 0.00319
26100 1 0.00319
28200 1 0.00319
28900 1 0.00321
31600 1 0.00321
35200 1 0.00321
38900 1 0.0032
55200 1 0.00321
55600 1 0.00322
58300 1 0.00321
59900 1 0.00321
60600 1 0.00321
64000 1 0.00321
69300 1 0.00321
73300 1 0.00321
74400 1 0.00322
84000 1 0.00321
85400 1 0.00321
102000 1 0.00321
108000 1 0.00321
123000 1 0.00321
132000 1 0.00321
138000 1 0.00321
139000 1 0.00321
151000 1 0.00321
176000 1 0.00321
178000 1 0.00321
180000 1 0.00321
209000 1 0.00321
209000 1 0.00321
215000 1 0.00321
223000 1 0.00321
229000 1 0.00321
230000 1 0.00321
244000 1 0.00321
257000 1 0.00321
307000 1 0.00321
312000 1 0.00321
314000 1 0.00321
323000 1 0.00321
333000 1 0.00321

CL214 ----> CL122

image

No. of shared pairs: :52

CL214 ----> CL51

image

No. of shared pairs: :11