Cluster no. 244

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Cluster is part of supercluster: 28

Cluster characteristics:

size 3004
size_real 3004
ecount 132017
supercluster 28
annotations_summary 92.38% 45S_rDNA/25S_rDNA
pair_completeness 0.866998135487881
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00033288948069241
satellite_probability 6.1246173690846e-24
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
25S_rDNA 25S_rDNA 2775 0.92

clusters with similarity:

Cluster Number of similarity hits
194 191
164 184

clusters connected through mates:

Cluster Number of shared
read pairs
k
194 55 0.194
164 46 0.145
6 3 0.000789
8 2 0.00122
44 2 0.000661
68 2 0.00132
153 2 0.00145
189 2 0.0019
1 1 0.000283
2 1 0.00018
7 1 0.000221
12 1 0.000246
20 1 0.00029
26 1 0.000474
29 1 0.00054
31 1 2e-04
36 1 0.000624
42 1 0.000541
46 1 0.000615
54 1 0.000934
56 1 0.00304
61 1 0.000592
64 1 0.00104
65 1 0.000738
70 1 0.00107
73 1 0.00108
75 1 0.000332
81 1 0.000437
83 1 0.000794
90 1 0.000408
97 1 0.000615
103 1 0.000486
138 1 0.00122
141 1 0.000755
145 1 0.000672
150 1 0.00094
175 1 0.00147
178 1 0.00177
181 1 0.00119
182 1 0.00114
205 1 0.00137
208 1 0.002
217 1 0.00163
233 1 0.00384
256 1 0.00291
279 1 0.00292
447 1 0.00787
1200 1 0.0087
2380 1 0.00881
2730 1 0.0087
3270 1 0.00873
5550 1 0.00901
8940 1 0.00909
12200 1 0.00917
13500 1 0.00905
22000 1 0.00922
227000 1 0.00926
270000 1 0.00926

CL244 ----> CL194

image

No. of shared pairs: :55

CL244 ----> CL164

image

No. of shared pairs: :46