Cluster no. 258

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Cluster is part of supercluster: 11

Cluster characteristics:

size 2415
size_real 2415
ecount 6697
supercluster 11
annotations_summary
pair_completeness 0.398378691372322
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00041407867494824
satellite_probability 6.52979343237575e-21
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
49 9
36 2
15 1
19 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
49 230 0.107
36 120 0.0595
31 4 0.000738
4490 4 0.00761
8250 4 0.00763
163 3 0.00169
2980 3 0.00569
8550 3 0.00574
14200 3 0.00575
2 2 0.000335
206 2 0.00207
232 2 0.0022
8570 2 0.00384
9340 2 0.00382
16800 2 0.00384
24500 2 0.00384
29300 2 0.00384
55000 2 0.00384
72700 2 0.00384
75500 2 0.00384
78500 2 0.00384
111000 2 0.00384
293000 2 0.00384
312000 2 0.00384
347000 2 0.00384
3 1 0.000247
4 1 0.00026
6 1 0.000237
9 1 0.000325
14 1 0.000265
15 1 0.000355
17 1 0.000162
19 1 0.000427
23 1 0.000358
26 1 0.000396
29 1 0.000441
30 1 0.000248
33 1 0.000559
39 1 0.000522
40 1 0.000251
43 1 0.000329
57 1 0.000659
74 1 0.000519
86 1 0.000343
90 1 0.000349
92 1 0.000897
93 1 0.000788
95 1 0.000692
97 1 0.00049
99 1 0.000849
106 1 0.000531
110 1 0.000731
113 1 0.000564
117 1 0.000601
129 1 0.000911
134 1 0.000573
138 1 0.000811
140 1 0.000414
147 1 0.000323
157 1 0.000783
161 1 0.000554
187 1 0.000879
203 1 0.000943
213 1 0.00063
231 1 0.00142
245 1 0.000896
283 1 0.00158
390 1 0.00177
2240 1 0.00189
3500 1 0.0019
5370 1 0.00191
10200 1 0.00191
10900 1 0.00191
15500 1 0.00192
15900 1 0.00192
26200 1 0.00192
27700 1 0.00192
34000 1 0.00192
35400 1 0.00192
39500 1 0.00192
40000 1 0.00192
41500 1 0.00192
42900 1 0.00192
43500 1 0.00192
43700 1 0.00192
44400 1 0.00192
48700 1 0.00192
52800 1 0.00192
53900 1 0.00192
55700 1 0.00192
59000 1 0.00192
59000 1 0.00192
60700 1 0.00192
61400 1 0.00192
65700 1 0.00192
68800 1 0.00192
69700 1 0.00192
70100 1 0.00192
70400 1 0.00192
74500 1 0.00192
75300 1 0.00192
78300 1 0.00192
82800 1 0.00192
85100 1 0.00192
92100 1 0.00192
96900 1 0.00192
134000 1 0.00192
151000 1 0.00192
153000 1 0.00192
174000 1 0.00192
175000 1 0.00192
185000 1 0.00192
185000 1 0.00192
232000 1 0.00192
247000 1 0.00192
247000 1 0.00192
256000 1 0.00192
262000 1 0.00192
267000 1 0.00192
267000 1 0.00192
274000 1 0.00192
277000 1 0.00192
281000 1 0.00192
287000 1 0.00192
288000 1 0.00192
297000 1 0.00192
306000 1 0.00192
308000 1 0.00192
312000 1 0.00192
337000 1 0.00192
343000 1 0.00192

CL258 ----> CL49

image

No. of shared pairs: :230

CL258 ----> CL36

image

No. of shared pairs: :120