Cluster no. 261

Go back to cluster table

Cluster is part of supercluster: 152

Cluster characteristics:

size 2328
size_real 2328
ecount 44370
supercluster 152
annotations_summary 100.00% organelle/plastid
pair_completeness 0.919208573784007
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000429553264604811
satellite_probability 1.97433114407246e-24
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 2328 1

clusters with similarity:

Cluster Number of similarity hits
131 49
262 4

clusters connected through mates:

Cluster Number of shared
read pairs		 k
131 21 0.0685
262 19 0.184
45 2 0.00076
188 2 0.0129
201 2 0.0133
2 1 0.000182
4 1 0.000296
8 1 0.00063
9 1 0.000383
13 1 0.000684
15 1 0.000426
18 1 0.000552
21 1 0.000434
35 1 0.000314
37 1 0.000326
39 1 0.000693
64 1 0.00111
86 1 0.000409
87 1 0.000756
88 1 0.000435
98 1 0.0011
128 1 0.00136
136 1 0.00161
144 1 0.00185
150 1 0.000995
154 1 0.00171
165 1 0.000828
194 1 0.00443
199 1 0.00319
203 1 0.00169
220 1 0.0023
224 1 0.00749
6060 1 0.0187
19800 1 0.0192

CL261 ----> CL131

image

No. of shared pairs: :21

CL261 ----> CL262

image

No. of shared pairs: :19