Cluster no. 263

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Cluster is part of supercluster: 154

Cluster characteristics:

size 2240
size_real 2240
ecount 5611
supercluster 154
annotations_summary
pair_completeness 0.395638629283489
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000446428571428571
satellite_probability 6.52979343237575e-21
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
29 1
33 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
286 47 0.0556
152 38 0.0173
376 21 0.0361
745 11 0.0213
3480 9 0.0183
4640 7 0.0142
2620 6 0.0122
11200 6 0.0123
2140 5 0.0101
7 4 0.000816
49 4 0.00188
1730 4 0.00813
15400 4 0.00819
23 3 0.00109
67 3 0.00117
1010 3 0.00598
7410 3 0.00614
19500 3 0.00615
26600 3 0.00615
36400 3 0.00616
64200 3 0.00617
9 2 0.000657
14 2 0.000534
17 2 0.000326
19 2 0.000867
31 2 0.000372
39 2 0.00106
63 2 0.000589
97 2 0.000998
98 2 0.00149
138 2 0.00167
2150 2 0.00406
3000 2 0.00407
5640 2 0.00407
6800 2 0.00408
7670 2 0.00409
8330 2 0.00409
14700 2 0.00409
16400 2 0.0041
22600 2 0.0041
29200 2 0.00411
39000 2 0.00411
43100 2 0.00411
44500 2 0.00411
47500 2 0.00411
71500 2 0.00411
84000 2 0.00411
97500 2 0.00412
235000 2 0.00412
276000 2 0.00412
309000 2 0.00412
316000 2 0.00412
320000 2 0.00412
335000 2 0.00412
3 1 0.000249
6 1 0.000239
12 1 0.000225
15 1 0.000359
16 1 0.000339
18 1 0.000445
21 1 0.000365
22 1 0.00032
26 1 0.000402
29 1 0.000448
32 1 0.000523
35 1 0.000276
36 1 0.000505
37 1 0.000285
43 1 0.000333
71 1 0.000374
72 1 0.000583
74 1 0.000528
82 1 0.000695
83 1 0.000611
105 1 0.000526
107 1 0.000856
117 1 0.000613
126 1 0.000628
129 1 0.000941
141 1 0.000588
153 1 0.000569
168 1 0.00062
197 1 0.000724
211 1 0.00101
216 1 0.00133
228 1 0.00139
233 1 0.00157
235 1 0.000897
259 1 0.00145
289 1 0.00171
453 1 0.0018
497 1 0.00188
963 1 0.00201
2820 1 0.00205
4550 1 0.00203
4630 1 0.00204
5920 1 0.00204
6220 1 0.00204
6500 1 0.00205
7270 1 0.00205
7370 1 0.00205
9300 1 0.00205
9400 1 0.00205
10800 1 0.00206
11400 1 0.00205
11500 1 0.00205
12500 1 0.00205
13600 1 0.00205
15100 1 0.00205
15300 1 0.00205
20200 1 0.00205
22100 1 0.00205
24400 1 0.00206
29200 1 0.00205
29300 1 0.00206
34800 1 0.00206
37500 1 0.00206
42800 1 0.00206
44000 1 0.00206
48200 1 0.00206
49500 1 0.00206
50500 1 0.00206
51100 1 0.00206
58200 1 0.00206
58400 1 0.00206
58900 1 0.00206
60200 1 0.00206
65700 1 0.00206
69300 1 0.00206
70300 1 0.00206
71000 1 0.00206
73900 1 0.00206
74800 1 0.00206
75300 1 0.00206
76400 1 0.00206
78500 1 0.00206
82700 1 0.00206
84500 1 0.00206
1e+05 1 0.00206
115000 1 0.00206
118000 1 0.00206
142000 1 0.00206
144000 1 0.00206
156000 1 0.00206
169000 1 0.00206
171000 1 0.00206
198000 1 0.00206
203000 1 0.00206
205000 1 0.00206
208000 1 0.00206
209000 1 0.00206
209000 1 0.00206
211000 1 0.00206
215000 1 0.00206
230000 1 0.00206
230000 1 0.00206
259000 1 0.00206
263000 1 0.00206
264000 1 0.00206
282000 1 0.00206
297000 1 0.00206
298000 1 0.00206
302000 1 0.00206
302000 1 0.00206
310000 1 0.00206
321000 1 0.00206
334000 1 0.00206
348000 1 0.00206

CL263 ----> CL286

image

No. of shared pairs: :47

CL263 ----> CL152

image

No. of shared pairs: :38

CL263 ----> CL376

image

No. of shared pairs: :21

CL263 ----> CL745

image

No. of shared pairs: :11