Cluster no. 270

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Cluster is part of supercluster: 159

Cluster characteristics:

size 2005
size_real 2005
ecount 32093
supercluster 159
annotations_summary 99.20% organelle/plastid
pair_completeness 0.924184261036468
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00897755610972569
satellite_probability 5.57800998975381e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 1989 0.99

clusters with similarity:

Cluster Number of similarity hits
236 14
275 5

clusters connected through mates:

Cluster Number of shared
read pairs		 k
275 16 0.156
236 11 0.121
11 1 0.000287
30 1 0.000281
31 1 0.000203
39 1 0.000697
40 1 0.000285
42 1 0.000561
62 1 0.000378
69 1 0.000943
72 1 0.000788
76 1 0.000744
86 1 0.000411
94 1 0.003
97 1 0.000641
122 1 0.000816
131 1 0.00337
139 1 0.000898
148 1 0.000943
159 1 0.00121
181 1 0.00129
191 1 0.00104
262 1 0.0107
440 1 0.0136
1110 1 0.0208
37900 1 0.0247
46100 1 0.025
69800 1 0.0244
319000 1 0.0247

CL270 ----> CL275

image

No. of shared pairs: :16

CL270 ----> CL236

image

No. of shared pairs: :11