Cluster no. 277

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Cluster is part of supercluster: 167

Cluster characteristics:

size 1848
size_real 1848
ecount 16148
supercluster 167
annotations_summary
pair_completeness 0.753320683111954
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0216450216450216
satellite_probability 7.21220342707656e-21
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs
k
1180 7 0.0498
876 5 0.0356
851 4 0.028
4310 4 0.03
5800 4 0.0297
19100 4 0.0303
6 3 0.000784
340 3 0.0159
611 3 0.021
3140 3 0.0222
16700 3 0.0226
32100 3 0.0227
35400 3 0.0227
68000 3 0.0228
40 2 0.000556
51 2 0.000686
70 2 0.00208
3710 2 0.0149
3730 2 0.015
3810 2 0.015
4430 2 0.0147
5570 2 0.0149
7640 2 0.015
9200 2 0.015
10000 2 0.0149
11100 2 0.0152
12900 2 0.0152
20900 2 0.015
27900 2 0.0151
29500 2 0.0153
73400 2 0.0152
157000 2 0.0153
207000 2 0.0153
333000 2 0.0153
3 1 0.000273
4 1 0.000289
7 1 0.00022
11 1 0.000279
13 1 0.000648
17 1 0.000173
24 1 0.000322
27 1 0.000712
31 1 0.000199
49 1 0.000565
50 1 0.000584
57 1 0.000887
67 1 0.000451
78 1 0.000389
86 1 0.000396
87 1 0.000713
98 1 0.00101
99 1 0.00127
105 1 0.000647
112 1 0.00129
137 1 0.000954
154 1 0.0015
162 1 0.000781
164 1 0.00294
181 1 0.00116
191 1 0.000952
236 1 0.00551
249 1 0.00268
275 1 0.00518
1570 1 0.0076
5140 1 0.00733
6180 1 0.00755
6690 1 0.00735
7510 1 0.00755
11100 1 0.00746
11700 1 0.00746
13500 1 0.00755
22200 1 0.00755
26400 1 0.0076
30100 1 0.00763
32300 1 0.00763
33400 1 0.00758
38700 1 0.00763
38900 1 0.00758
41000 1 0.00763
44700 1 0.00763
44900 1 0.00758
51300 1 0.00766
53200 1 0.0076
67200 1 0.00766
69400 1 0.0076
69900 1 0.00766
70600 1 0.0076
90700 1 0.00763
106000 1 0.00763
124000 1 0.00763
132000 1 0.00763
156000 1 0.00763
180000 1 0.00763
223000 1 0.00763
246000 1 0.00763
268000 1 0.00763
274000 1 0.00763
307000 1 0.00763
347000 1 0.00763