Cluster no. 278

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Cluster is part of supercluster: 85

Cluster characteristics:

size 1741
size_real 1741
ecount 10452
supercluster 85
annotations_summary
pair_completeness 0.7375249500998
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000574382538770821
satellite_probability 8.20691448488047e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
29 41
193 2

clusters connected through mates:

Cluster Number of shared
read pairs
k
29 86 0.0458
193 69 0.12
3750 6 0.0435
96 5 0.00455
24300 3 0.0226
116 2 0.000936
369 2 0.0115
5270 2 0.0148
10100 2 0.0149
210000 2 0.0151
216000 2 0.0151
220000 2 0.0151
225000 2 0.0151
13 1 0.000648
17 1 0.000173
25 1 0.000526
26 1 0.000468
31 1 0.000199
32 1 0.000642
34 1 0.000412
36 1 0.000614
39 1 0.000655
42 1 0.000533
50 1 0.000584
52 1 0.000523
56 1 0.00283
63 1 0.000329
70 1 0.00104
84 1 0.00061
89 1 0.000709
95 1 0.000945
99 1 0.00127
119 1 0.00152
125 1 0.00116
145 1 0.000661
155 1 0.00118
163 1 0.000721
165 1 0.000775
176 1 0.00164
179 1 0.00139
182 1 0.00111
219 1 0.00233
247 1 0.00161
1600 1 0.00704
4120 1 0.0073
33700 1 0.00749
42100 1 0.00755
71600 1 0.00752
83600 1 0.00752
88900 1 0.00755
90700 1 0.00755
96800 1 0.00755
137000 1 0.00755
208000 1 0.00755
262000 1 0.00755
303000 1 0.00755
320000 1 0.00755
325000 1 0.00755

CL278 ----> CL29

image

No. of shared pairs: :86

CL278 ----> CL193

image

No. of shared pairs: :69