Cluster no. 282

Go back to cluster table

Cluster is part of supercluster: 172

Cluster characteristics:

size 1567
size_real 1567
ecount 15169
supercluster 172
annotations_summary
pair_completeness 0.672358591248666
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.0363752393107849
satellite_probability 1.20715521503335e-19
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters with similarity:

Cluster Number of similarity hits
96 36
154 1
189 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
96 62 0.0553
17 4 0.00069
47 4 0.00156
936 4 0.0235
3750 4 0.025
7180 4 0.0253
16000 4 0.0256
19300 4 0.0256
3 3 0.000813
72900 3 0.0194
4 2 0.000574
9 2 0.000737
16 2 0.000765
28 2 0.00131
40 2 0.000552
70 2 0.00203
76 2 0.00137
95 2 0.00185
121 2 0.00306
1090 2 0.0125
18300 2 0.0128
20100 2 0.0129
82800 2 0.0129
338000 2 0.0129
1 1 0.000279
6 1 0.00026
11 1 0.000278
12 1 0.000243
15 1 0.000408
22 1 0.000358
23 1 0.000412
25 1 0.00052
26 1 0.000464
30 1 0.000272
43 1 0.000374
45 1 0.000365
53 1 0.000339
54 1 0.000895
55 1 0.000264
61 1 0.000576
63 1 0.000327
75 1 0.000327
79 1 0.000401
86 1 0.000392
94 1 0.00223
98 1 0.000985
99 1 0.00123
116 1 0.000463
130 1 0.000465
141 1 0.00073
150 1 0.000901
151 1 0.000979
154 1 0.00145
157 1 0.0011
161 1 0.000695
165 1 0.000762
168 1 0.00078
399 1 0.00567
476 1 0.00484
573 1 0.00531
741 1 0.00576
843 1 0.00621
3200 1 0.00621
25200 1 0.00641
30500 1 0.00643
30700 1 0.00643
31800 1 0.00647
32600 1 0.00647
60000 1 0.00645
76900 1 0.00649
83900 1 0.00645
108000 1 0.00647
155000 1 0.00647
164000 1 0.00647
190000 1 0.00647
217000 1 0.00647
302000 1 0.00647
350000 1 0.00647

CL282 ----> CL96

image

No. of shared pairs: :62