Cluster no. 285

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Cluster is part of supercluster: 170

Cluster characteristics:

size 1389
size_real 1389
ecount 12030
supercluster 170
annotations_summary 0.07% organelle/plastid
pair_completeness 0.687727825030377
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00215982721382289
satellite_probability 1.94805139038498e-22
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 1 0.00072

clusters connected through mates:

Cluster Number of shared
read pairs
k
405 29 0.153
1360 8 0.0565
17 3 0.00052
27300 3 0.0229
72500 3 0.0231
238 2 0.00488
147000 2 0.0154
243000 2 0.0154
264000 2 0.0154
309000 2 0.0154
7 1 0.00022
11 1 0.00028
14 1 0.000295
16 1 0.000386
24 1 0.000322
48 1 0.000305
50 1 0.000585
57 1 0.000888
63 1 0.000329
66 1 0.000349
84 1 0.000611
96 1 0.000912
99 1 0.00127
134 1 0.000739
153 1 0.000715
159 1 0.0011
161 1 0.000707
163 1 0.000723
186 1 0.000726
187 1 0.00134
189 1 0.000931
191 1 0.000953
196 1 0.000859
205 1 0.00133
208 1 0.00192
212 1 0.00219
243 1 0.00139
761 1 0.0066
1790 1 0.00704
2620 1 0.00735
26700 1 0.00769
57200 1 0.00769
65700 1 0.00775
131000 1 0.00772
175000 1 0.00772
185000 1 0.00772
216000 1 0.00772
217000 1 0.00772
3e+05 1 0.00772
334000 1 0.00772
347000 1 0.00772

CL285 ----> CL405

image

No. of shared pairs: :29