Cluster no. 286

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Cluster is part of supercluster: 175

Cluster characteristics:

size 1387
size_real 1387
ecount 3166
supercluster 175
annotations_summary
pair_completeness 0.315939278937381
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000720980533525595
satellite_probability 1.08737944923628e-20
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

No protein domains detected

protein domains:


Reads annotation summary

No similarity hits to repeat databases found

clusters connected through mates:

Cluster Number of shared
read pairs
k
263 47 0.0556
745 14 0.0357
4110 7 0.0191
1040 6 0.0157
31 3 0.00057
435 3 0.0067
2150 3 0.00814
10300 3 0.00824
11900 3 0.00823
18800 3 0.00828
36700 3 0.00828
4 2 0.000542
29 2 0.000949
33 2 0.00123
66 2 0.000647
1730 2 0.00544
2470 2 0.00541
6800 2 0.00547
8150 2 0.00549
18700 2 0.00552
19700 2 0.0055
20600 2 0.00552
23000 2 0.00551
29200 2 0.00551
45000 2 0.00552
67000 2 0.00552
132000 2 0.00553
154000 2 0.00553
175000 2 0.00553
179000 2 0.00553
235000 2 0.00553
325000 2 0.00553
330000 2 0.00553
1 1 0.000264
5 1 0.000532
7 1 0.000209
16 1 0.000354
17 1 0.000167
23 1 0.00038
25 1 0.000469
28 1 0.000575
44 1 0.000305
49 1 5e-04
63 1 0.000306
67 1 0.000408
72 1 0.000629
73 1 0.000849
78 1 0.000357
79 1 0.00037
85 1 0.000606
86 1 0.000363
90 1 0.00037
96 1 0.000752
103 1 0.000433
107 1 0.000958
127 1 0.000656
130 1 0.000424
150 1 0.000759
154 1 0.00112
162 1 0.000662
169 1 0.00093
297 1 0.00209
302 1 0.00214
376 1 0.00219
453 1 0.00232
2190 1 0.0027
2910 1 0.00272
5010 1 0.00274
5640 1 0.00273
6500 1 0.00275
6760 1 0.00274
6960 1 0.00275
7500 1 0.00275
9700 1 0.00275
12300 1 0.00274
12500 1 0.00275
13600 1 0.00276
14100 1 0.00275
14100 1 0.00275
14700 1 0.00275
16000 1 0.00275
16800 1 0.00277
17400 1 0.00275
20200 1 0.00276
20300 1 0.00275
21000 1 0.00276
21800 1 0.00275
22600 1 0.00275
23100 1 0.00276
25300 1 0.00276
25400 1 0.00275
26100 1 0.00276
31500 1 0.00276
33300 1 0.00277
36900 1 0.00277
38800 1 0.00276
39000 1 0.00276
46900 1 0.00277
49500 1 0.00276
50000 1 0.00276
51800 1 0.00276
51900 1 0.00276
57900 1 0.00277
58400 1 0.00277
61600 1 0.00277
62200 1 0.00277
67000 1 0.00277
69900 1 0.00277
74700 1 0.00277
77600 1 0.00276
77900 1 0.00277
79700 1 0.00276
79900 1 0.00276
80000 1 0.00276
84000 1 0.00276
92200 1 0.00277
104000 1 0.00277
106000 1 0.00277
109000 1 0.00277
115000 1 0.00277
121000 1 0.00277
121000 1 0.00277
123000 1 0.00277
129000 1 0.00277
138000 1 0.00277
141000 1 0.00277
148000 1 0.00277
171000 1 0.00277
173000 1 0.00277
183000 1 0.00277
184000 1 0.00277
184000 1 0.00277
189000 1 0.00277
2e+05 1 0.00277
205000 1 0.00277
209000 1 0.00277
211000 1 0.00277
211000 1 0.00277
215000 1 0.00277
238000 1 0.00277
238000 1 0.00277
243000 1 0.00277
246000 1 0.00277
250000 1 0.00277
250000 1 0.00277
256000 1 0.00277
273000 1 0.00277
277000 1 0.00277
286000 1 0.00277
290000 1 0.00277
291000 1 0.00277
305000 1 0.00277
315000 1 0.00277
316000 1 0.00277
322000 1 0.00277
331000 1 0.00277
335000 1 0.00277
335000 1 0.00277
338000 1 0.00277

CL286 ----> CL263

image

No. of shared pairs: :47

CL286 ----> CL745

image

No. of shared pairs: :14