Cluster no. 290

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Cluster is part of supercluster: 179

Cluster characteristics:

size 1223
size_real 1223
ecount 10129
supercluster 179
annotations_summary 18.48% Class_II/Subclass_1/TIR/hAT:hAT-TPase
pair_completeness 0.809171597633136
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.000817661488143908
satellite_probability 2.15940292115794e-23
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
hAT hAT-TPase hAT hAT-TPase 226 0.18

clusters with similarity:

Cluster Number of similarity hits
120 1
189 1

clusters connected through mates:

Cluster Number of shared
read pairs
k
1080 14 0.177
120 5 0.00377
30 4 0.00112
143 3 0.00244
10700 3 0.0441
9 2 0.000762
14 2 0.000602
25 2 0.00109
175 2 0.00313
249 2 0.00649
197000 2 0.0305
309000 2 0.0305
4 1 0.000295
8 1 0.000624
17 1 0.000175
19 1 0.00053
31 1 0.000201
37 1 0.000324
42 1 0.000553
56 1 0.0035
62 1 0.000375
68 1 0.000682
74 1 0.000679
75 1 0.000337
78 1 0.000399
81 1 0.000445
85 1 0.000739
102 1 0.000426
114 1 0.00147
115 1 0.000563
116 1 0.000483
122 1 8e-04
128 1 0.00133
174 1 0.000901
189 1 0.00099
208 1 0.00219
209 1 0.00377
211 1 0.00177
214 1 0.00267
219 1 0.00277
231 1 0.00402
283 1 0.00568
452 1 0.01
1770 1 0.0135
15400 1 0.0147
22400 1 0.0149
28100 1 0.0149
29100 1 0.0152
65700 1 0.0152
134000 1 0.0153
152000 1 0.0153
154000 1 0.0153
183000 1 0.0153
188000 1 0.0153
212000 1 0.0153
282000 1 0.0153

CL290 ----> CL1077

image

No. of shared pairs: :14