Cluster no. 310

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Cluster is part of supercluster: 199

Cluster characteristics:

size 853
size_real 853
ecount 15209
supercluster 199
annotations_summary 99.41% organelle/plastid
pair_completeness 0.88716814159292
pbs_score None
TR_score None
TR_monomer_length None
loop_index 0.00117233294255569
satellite_probability 3.92929639329527e-24
consensus None
TAREAN_annotation Other
orientation_score 1

protein domains:

protein domains:


Reads annotation summary

  cl_string domain Freq proportion
plastid plastid 848 0.99

clusters with similarity:

Cluster Number of similarity hits
131 6

clusters connected through mates:

Cluster Number of shared
read pairs		 k
131 16 0.0565
201 10 0.0791
6 1 0.000269
22 1 0.000376
28 1 0.000713
34 1 0.000431
43 1 0.000393
144 1 0.00193
205 1 0.00154
11900 1 0.0351
301000 1 0.0377
334000 1 0.0377

CL310 ----> CL131

image

No. of shared pairs: :16

CL310 ----> CL201

image

No. of shared pairs: :10