Cluster no. 312

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Cluster is part of supercluster: 201

Cluster characteristics:

size 803
size_real 803
ecount 35888
supercluster 201
annotations_summary
pair_completeness 0.930288461538462
pbs_score 0.0
TR_score 0.7406177451839552
TR_monomer_length 627.0
loop_index 0.971357409713574
satellite_probability 0.819019943211142
consensus 
TCAAACACATTGATTTTAGTGTACATCTCAGTTCTAATTCTATTTCAGTTTTGTTCAATTTCTAGCGTATTGATTTGAAT
GTACGTGTGAAATTTTAGCACATTGATTTCATGTACATTGCAATTTTTATTTTTATTTCAATTTGATTCTAACGTACATG
TCAATTTCTATGACAATTCCTACATGTACATGTTAATTTGCATTTATATTCTATTCAATGTCAATTTCAATTTCAAATTT
GTATTTCCGTTTCTATTTCTTATTTTATTTCTATCTCCATTACCACATTAGAAATCGAAATAGAAACATCTAGACATACA
ATTACTCAGTACATTGATGATCACAAGTTATTTAATTGATTGAGTTAACGAGTGGAAAAAGTCTGCATGTCAACTACGGA
ATTTGTCCAAGGGTACTGAGGCGCGAATGGACCATAAGACCTAGTTTTCAATGATCGTTTTCTGACATGTGTGCTCTTTG
ACTACTTGTTAACTCTCTCTGTGCATAATTGGTTTCATTAAAAGAGTCAATTTCAATTTCTCTTCAATGTCACATTCATA
TTTTGTCACATTGATTTCTTTGGACATCTCAATTTTTAATGAGCTTATTTTAAAGTTCATGTGATTT

  

  

    TAREAN_annotation
    Putative satellite (high confidence)
  

  

    orientation_score
    1
  

 


 
 protein domains:



No protein domains detected



protein domains:


  





 
 Reads annotation summary



No similarity hits to repeat databases found


 
 clusters connected through mates:



  

    
      




 

    Cluster
    Number of shared
 read pairs		
    k
  

      

   		
 

 

   
     

       




  

    5590
    7
    0.359
  

  

    17
    2
    0.000353
  

  

    11
    1
    0.000289
  

  

    19
    1
    0.000545
  

  

    40
    1
    0.000287
  

  

    56
    1
    0.00424
  

  

    70
    1
    0.00118
  

  

    91
    1
    0.0015
  

  

    92
    1
    0.00164
  

  

    98
    1
    0.00114
  

  

    214
    1
    0.00308
  

  

    245
    1
    0.00164
  

  

    265
    1
    0.00733
  

  

    313
    1
    0.00727
  

  

    76100
    1
    0.0625
  

  

    115000
    1
    0.0645
  

  

    194000
    1
    0.0645
  

  

    214000
    1
    0.0645
  

  

    271000
    1
    0.0645