Repeat annotation summary
| Genome_proportion[%] | Nsuperclusters | Nclusters | Nreads
------------------------------------------------------------------------------------------------------------
Unclassified_repeat | 4.17 | 4 | 22 | 252958
|--rDNA | 0 | 0 | 0 | 0
| |--45S_rDNA | 0 | 0 | 0 | 0
| | |--18S_rDNA | 0 | 0 | 0 | 0
| | |--25S_rDNA | 0 | 0 | 0 | 0
| | '--5.8S_rDNA | 0 | 0 | 0 | 0
| '--5S_rDNA | 0 | 0 | 0 | 0
|--satellite | 1.42 | 5 | 7 | 85983
'--mobile_element | 0.04 | 1 | 1 | 2227
|--Class_I | 0 | 0 | 0 | 0
| |--SINE | 0 | 0 | 0 | 0
| |--LTR | 0 | 0 | 0 | 0
| | |--Ty1_copia | 8.44 | 19 | 35 | 512001
| | | |--Ale | 0 | 0 | 0 | 0
| | | |--Alesia | 0 | 0 | 0 | 0
| | | |--Angela | 0 | 0 | 0 | 0
| | | |--Bianca | 0 | 0 | 0 | 0
| | | |--Bryco | 0 | 0 | 0 | 0
| | | |--Gymco-I | 0.52 | 1 | 2 | 31347
| | | |--Gymco-II | 2.33 | 2 | 7 | 141041
| | | |--Ikeros | 0.08 | 1 | 1 | 5069
| | | |--Ivana | 0.38 | 3 | 3 | 22770
| | | |--Osser | 0 | 0 | 0 | 0
| | | |--SIRE | 0 | 0 | 0 | 0
| | | |--TAR | 0 | 0 | 0 | 0
| | | |--Tork | 0.82 | 3 | 5 | 49744
| | | '--Ty1-outgroup | 0 | 0 | 0 | 0
| | '--Ty3_gypsy | 0 | 0 | 0 | 0
| | |--non-chromovirus | 0 | 0 | 0 | 0
| | | |--nonchromo-outgroup | 0 | 0 | 0 | 0
| | | |--Phygy | 0 | 0 | 0 | 0
| | | |--Selgy | 0 | 0 | 0 | 0
| | | '--OTA | 0.87 | 4 | 4 | 53066
| | | |--Athila | 5.03 | 9 | 17 | 305117
| | | '--Ogre_Tat | 2.19 | 5 | 8 | 132633
| | | |--TatI | 0 | 0 | 0 | 0
| | | |--TatII | 4.2 | 10 | 19 | 254702
| | | |--TatIII | 9.91 | 9 | 37 | 601255
| | | |--TatIV_Ogre | 0 | 0 | 0 | 0
| | | '--TatV | 0.01 | 1 | 1 | 659
| | '--chromovirus | 0.43 | 4 | 6 | 26137
| | |--Chlamyvir | 0 | 0 | 0 | 0
| | |--Tcn1 | 0 | 0 | 0 | 0
| | |--CRM | 3.75 | 10 | 17 | 227679
| | |--Galadriel | 0.02 | 1 | 1 | 1445
| | |--Tekay | 0.77 | 4 | 4 | 46696
| | |--Reina | 0 | 0 | 0 | 0
| | |--chromo-outgroup | 0 | 0 | 0 | 0
| | '--chromo-unclass | 0.13 | 1 | 1 | 7605
| |--pararetrovirus | 0 | 0 | 0 | 0
| |--DIRS | 0 | 0 | 0 | 0
| |--Penelope | 0 | 0 | 0 | 0
| '--LINE | 0.63 | 4 | 4 | 38402
'--Class_II | 0 | 0 | 0 | 0
|--Subclass_1 | 0 | 0 | 0 | 0
| '--TIR | 0 | 0 | 0 | 0
| |--MITE | 0 | 0 | 0 | 0
| |--EnSpm_CACTA | 0.03 | 2 | 3 | 2081
| |--hAT | 0.51 | 5 | 6 | 30744
| |--Kolobok | 0 | 0 | 0 | 0
| |--Merlin | 0 | 0 | 0 | 0
| |--MuDR_Mutator | 0 | 0 | 0 | 0
| |--Novosib | 0 | 0 | 0 | 0
| |--P | 0 | 0 | 0 | 0
| |--PIF_Harbinger | 0 | 0 | 0 | 0
| |--PiggyBac | 0 | 0 | 0 | 0
| |--Sola1 | 0.23 | 1 | 1 | 13870
| |--Sola2 | 0 | 0 | 0 | 0
| '--Tc1_Mariner | 0 | 0 | 0 | 0
'--Subclass_2 | 0 | 0 | 0 | 0
'--Helitron | 0 | 0 | 0 | 0
| Genome_proportion[%] | Nsuperclusters | Nclusters | Nreads
------------------------------------------------------------------------------------------------------------
organelle | 0 | 0 | 0 | 0
|--plastid | 0.8 | 9 | 12 | 48777
'--mitochondria | 0.04 | 1 | 1 | 2644
| Genome_proportion[%] | Nsuperclusters | Nclusters | Nreads
------------------------------------------------------------------------------------------------------------
Unclassifed | 10.3 | 99 | 103 | 624445
| Genome_proportion[%] | Nsuperclusters | Nclusters | Nreads
------------------------------------------------------------------------------------------------------------
contamination | 0 | 0 | 0 | 0