Tandem Repeat Analyzer

Run statistics:

Number of input sequences: 279233652

Number of analyzed sequences: 6064839

Cluster merging: No

Consensus files - fasta format:

Putative satellite (high confidence) - total 4 found

Putative satellite (low confidence) - total 6 found

Putative LTR element - total 6 found

Documentation

For the explanation of TAREAN output see the help section

Putative satellite (high confidence)

  Cluster Genome
Proportion
[%]
Genome
Proportion
Adjusted[%]
Size
real
Satellite
probability
Consensus
length
Consensus Graph
layout
Kmer
analysis
Connected
component
index C
Pair
completeness
index
P
Kmer
coverage
|V| |E| Pbs
score
Similarity
based
annotation
56 56 0.320 0.320 19317 0.981 805
AAATTGCTTTAAGAACAATTTTAAACGATTACAAATGCTTTAAAAACAATTAGAAATGCTTTAAAATGATTTTAAAATAT
TTTTCGAAACATCCTAAAATGGTTTCAAAATAATTTAAAATGTTTTAAAGACATTTTTAAATGCTTTCAAAATAGTTTTA
AATGCTTTAAAAACAATTTTAAACGCTTTAGAATGAATTTAAAAGGCTTTAAAAACAATCTAAGATGCTTTAACATGTTT
TTAAAACGCTTTACAAACAATTTCGAATGCTTTCAAAACAATATAAAATGTTTTCAAAACAATTTAAAATGTTTTCGATA
CAATTTAAAATGCTCTAAGAACAACTCAAAACAATTTAAAATGGTTTACAAACAATTTTAAAAGTTCAAAACAATTTAAA
ACACTTTAAAATGGTTTAAAAACAATATTAAAATGGTTTAGAAACAATTTGAAATGCTTTAACAACAATTTAAAAAGCTT
TAAAATGCTTTGAAAACAATTTAAAACACTTTAAAAATTGTTTACAATACTTTCAAAACAATTTTAAACCATTTGAATTG
CTTTAAGAACAATTTTAAATGTTTTTAAAATGCTTCAAAAACAATTTACGATGTTTTAAAGACATTTTTAAATTCTTTAA
AAATAAGTTTAAGTGCTTTATGAACCATCGAAAATGCTCTAAAACCATTTTAAAATGTTCTAAAAACAATTTTGAAAAGG
TTTAAAGAACTTTAATAACAATTTAAAATGCTTAAACACAGTTTACAATGTTTTCAAAACGAATTAAAATACTTCAAAAT
AATTT
seqclust/clustering/clusters/dir_CL0056/CL56_tmb.png report 0.995 0.955 0.422 19242 13500000 0
94 94 0.240 0.240 14344 0.937 89
TGATAATGATTAGTATAATAGTGTTACAAAATAGTAAAACATAAAACATAAAACAAACAAACAATATAGTAATAACATGA
ATTAAATAA
seqclust/clustering/clusters/dir_CL0094/CL94_tmb.png report 0.973 0.921 0.412 14344 13000000 0 0.01% organelle/plastid
164 164 0.140 0.140 8445 0.944 27
CCATGCGGCGCCCAAAATTTGGGGTTT
seqclust/clustering/clusters/dir_CL0164/CL164_tmb.png report 0.993 0.905 0.448 8437 11900000 0 0.41% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.01% 45S_rDNA/5.8S_rDNA
312 312 0.013 0.013 803 0.819 627
TCAAACACATTGATTTTAGTGTACATCTCAGTTCTAATTCTATTTCAGTTTTGTTCAATTTCTAGCGTATTGATTTGAAT
GTACGTGTGAAATTTTAGCACATTGATTTCATGTACATTGCAATTTTTATTTTTATTTCAATTTGATTCTAACGTACATG
TCAATTTCTATGACAATTCCTACATGTACATGTTAATTTGCATTTATATTCTATTCAATGTCAATTTCAATTTCAAATTT
GTATTTCCGTTTCTATTTCTTATTTTATTTCTATCTCCATTACCACATTAGAAATCGAAATAGAAACATCTAGACATACA
ATTACTCAGTACATTGATGATCACAAGTTATTTAATTGATTGAGTTAACGAGTGGAAAAAGTCTGCATGTCAACTACGGA
ATTTGTCCAAGGGTACTGAGGCGCGAATGGACCATAAGACCTAGTTTTCAATGATCGTTTTCTGACATGTGTGCTCTTTG
ACTACTTGTTAACTCTCTCTGTGCATAATTGGTTTCATTAAAAGAGTCAATTTCAATTTCTCTTCAATGTCACATTCATA
TTTTGTCACATTGATTTCTTTGGACATCTCAATTTTTAATGAGCTTATTTTAAAGTTCATGTGATTT
seqclust/clustering/clusters/dir_CL0312/CL312_tmb.png report 0.971 0.930 0.741 803 35900 0

Putative satellite (low confidence)

  Cluster Genome
Proportion
[%]
Genome
Proportion
Adjusted[%]
Size
real
Satellite
probability
Consensus
length
Consensus Graph
layout
Kmer
analysis
Connected
component
index C
Pair
completeness
index
P
Kmer
coverage
|V| |E| Pbs
score
Similarity
based
annotation
17 17 0.490 0.490 29841 0.00799 261
CACAAATGAACAATTCTTGGATGATACAAATGACAAAACCTCCTTTCTATATATAGGAGTCTAAGGGGTCACAATATAAT
CAGAGCCGACATAACAATAATAATGTAAGGGCACAAAAATAACAATAGTGGGCTTCTATGGGGCACAATAATAACAATAT
GGGGACTACATGGGTACATCAATATAATAAGGGGGTTGTACTAATAACAATAAGGGGTTACACTAGTAGTATAGGGGTCT
ACCACAACCTCCTTTACATTA
seqclust/clustering/clusters/dir_CL0017/CL17_tmb.png report 0.714 0.451 0.296 24488 20000000 0.226 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% organelle/plastid
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_I/LINE:LINE-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
38 38 0.400 0.400 24029 0.06190 92
ACACTTTTTAAAATGTTATAAAATGCTTAGGGTTTAGGGTTTATAACACTTTAGTAAATTCTTTTAATAAACACTTAAAT
AAAAGTTACAAA
seqclust/clustering/clusters/dir_CL0038/CL38_tmb.png report 0.847 0.824 0.377 23998 1550000 0.000 9.80% organelle/plastid
0.00% Class_I/LINE:LINE-ENDO
123 123 0.190 0.190 11507 0.02100 61
TGGTTGATTTTCATATTGAGACAATCTTTGTCACAATGCGACATTGGACCATGGTTGACCA
seqclust/clustering/clusters/dir_CL0123/CL123_tmb.png report 0.730 0.703 0.199 11460 396000 0.862 0.01% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
205 205 0.086 0.086 5221 0.02300 1200
CCATGGGTGGATGAATACCATGGGTTGATGCCATTTTCCATTCGGATCATTCCTCCCTCCTTAAGAAGCAATGGTCCCCA
TTGCGTGAAGTTCCCTCCTGCGAAGCCTTTGTTGAATATGAAGAGCCACTGAAGAGAAGGGTTTTATGTGGTTAACCCAT
AACCATGATGAACGAAGATCCGAGGATAGAGATACCCTGTAATGCTTGTGACCAACTGTGATACTGACAGTGTGCGGCCT
AGCAAATGGACTTCGATGAAGTGTGGTTTTGTGGATGACCCATAACCGTGATGTTGGTTGCTGATGAAGTAGCAGGTGCC
TACATAGCCTGGGGTGGGAGGGCACGTCTCCAAAGGGAACCCACTCCGAATGCTGCTCCAGAATTAAAATGGACATAACT
CGGTCAATATAACTCAGAATATTTATTATAACCTGTTTTTGGAAACAGAAGGACCATTTTGCATCTTCCCATGTGATAGA
AATCCTGATCCAGGCACTGGAATTTCAGATCTGCGCTGCAACTCTCCCGCCGTCACCAAAATTTCTGAAAAAAGAGCTGA
TTTTAAATCAGCGATATCTCCCTCATCCGGACTCCGATTCGACTGATTTTTTTTTTGAAATTGGGTATTTTTTCACAAAG
AATCCAGATCTGCTATTAGATTTTGTAGATTTTGCACCAAAAGTTTCAGATCTGATCTGCAAAGTCGCCGCCCAAAAAAA
ATCCTGCAAAAAAATGAAAAAAGAAAAATTCTTCCTGCTTGACCCAAGAAAGTGCTCTGTGGAGGTTGTAGCACATGCCT
GAAGTTTGTTGAATATTGCTGCAAAATTTGAAACTGAAATATGCATCAAACCCTCATTCCCATGGAATCATAACCTGCTC
TGATACCACTGATCCGGATCTTGGGGGGAGGCCCCCAAGATCTAAAAGATTGAAATGGATCTTGGGGGGAGAGACCCCCA
AGATCTGAAAACTTGAATTGCCAGAAGAAAAATAGGAGAATGCCCAATAAACAAAACCACAAAGAAACTTTTTTATTAAA
ACCGATAATAACTGTAAAGGCTACATTGTGGCGGACAATCTGTCCTTTTACAAAATGTGACTTGTTACTTATAGTATTTT
TCAGTTACAATACCACGGGTCAATTCCATGGGTGAATGAATACCATGGGTGGATGTCACTTACAATACCATGGGTAAATT
seqclust/clustering/clusters/dir_CL0205/CL205_tmb.png report 0.726 0.615 0.301 5219 161000 1.470 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
233 233 0.057 0.057 3429 0.70800 127
CGCCCTCGCCCGAACGACCGAAACGAAGCGACAAGGGAGAGCCGGGCAAACGAGCTGCACGAGCGTGCACAAAGCCAACC
TCGGGTCACAACTTAGCATTTTTGATACGGGCTCGTCCGCCCGGGCG
seqclust/clustering/clusters/dir_CL0233/CL233_tmb.png report 0.959 0.836 0.464 3429 1330000 0.000
238 238 0.054 0.054 3256 0.03780 428
CAGTTAAGCGCGCTTGAGCCAGAGGAGTTCTGGGATGGGTGACCTCCTGGGAAGTCCTGGTTACCGGGTGCAAGCCCCGG
AAGTGATGATTGATGCTATGTGATTCATTTCACTAGTTTCAATCCCACTTCTTCACCCCTGTGAGCATCACCCGATGCAA
TGAGTGCTAAGTGAACTATTCAAAAATCATGAGAAATTAGTCAGTTACGACTACCTCTCATGGAAATGGTCATACGTTTG
AATGACTTACTTAACGCAGTTGAATCCCAAAAATGATATCTAATATAATGCACTGCGTAAATCCCCCATACTTAAATTCA
AAAAGAGTCAAGGGATCTCTACTTGAATGGTTCATGAGGCACAATACTTGCTAAGGTTTTGCAAATGGGGTAGCAAGCTA
AGTGGGCTTGATTGTGGGGAAAACTCCA
seqclust/clustering/clusters/dir_CL0238/CL238_tmb.png report 0.910 0.706 0.591 3256 578000 0.000 11.39% 5S_rDNA/5S_rDNA

Putative LTR element

  Cluster Genome
Proportion
[%]
Genome
Proportion
Adjusted[%]
Size
real
Satellite
probability
Consensus
length
Consensus Graph
layout
Kmer
analysis
Connected
component
index C
Pair
completeness
index
P
Kmer
coverage
|V| |E| Pbs
score
Similarity
based
annotation
33 33 0.420 0.420 25241 0.0491 3080
GCCTTATCCATTTATGACAAACAGAAATTTGCTTGACAAGCATGACTGTAGGAGAAAGAAAACTATTTCTACTGAAAAAT
GCTCAGTTGACCTTGAGCTTATTTGCACTTTCCTACCTACCTACCCTATCAGCTGCAACTCCACTTGTAGCTCAAGCAAC
ATGATATTTCCAATGTAGCCAATCATTTATCTTATCTGATATTGGAGGCTCTTGACTGCATTCAACCTCAAAATAACCAT
GATAGTGAGATGACCAAATCAACTTATAATGTACCTGATCTTCATAATGCAAATGAAAATGAAAGACTGGTGTGCAAAGC
TTTTCCATGTATTCATTTATAGGGTCAAAGAAGACATGGTTATTTTGATGATCATCATAACATTCTATATCTTTAGACAA
CTGATTCTCAGCCACACAAAATTCCTTTGATGTGCTATCCAACTGCCTTTCTGCATGATTCCCACAAACAATGTAATTTT
CCTCACTATTATGATCATTATTTGATGTAAGCTGCTGCAAGGAATTACAAAAATGAACAACCTTTTCCTCTGCCTGAGGG
TTATAAAAGCTATCTTCCAGTATTTCTTCTTGGTGTTTGTAATCATTTTCATATTCATTATGATCCGAAGACTGACAAGT
CTGCTGCATCTCTACATCAATCTCAGAGGATGTAACATGGTTTTCATAAGTAAACCCCTGCTGATCTTCATGCTGCATTT
CATGAGATGTTATACTTTCTTCTTGGTGTTGAAATGCATTGTTATGAAGAGCCTCTAAAATTTCTTCATCCATAAATTCA
TCATCATCATAACAATCCTCCAAATATTGAATAAAACTCAAAGAATGTTTACAACAATCTTTGACCAGCAATAAGGAAGG
ATGACATTCTTTATACATGTCATAGAATACATCATGAAAATCAGCAAGAGAATATAATGAACCATTTTCCAAACTTTTAT
ACCAAGACCATGCTTTTCCTTCTAAAGTGGCCATAAACATCCTCATGAGACAATCCTCAGGAAAGTGAACCTTAAGACTG
CGTACATGCATATGGAACCTAACCAAATGAAGAGCAGCATTGTCTTTCTTTTCATCTTTGAATATTGGAAGATCATCTAA
CCAATCAACCTTTGGCATAGGATTTGGAAAACCAGGGATATGAGACCGATTCATAGGAGCATACCTGGCATTCATTCTTG
CAGTGGAATTCATCTTGAAACTTCATCAAGCTACTGATCTTCTAGCAGTGGAGTCACCTTCCAATTTCTTATTCGATGTG
TGGAGTCGCCAAGGTAGTTTTGCAGCCTCAAAAAGATGTCTGAGCTCCTGCTACCTTCAGAAGTTCAGCTTCATAATTTC
GGGAATGAGTAATCTTCAGACTCCCGGCAGACGCACCAAAATGTTATCACAAAATCACCCTGGAAGGCTGCAGCCCAGGA
AGACTTCAAGTAACTATTTCAAACCAACTTTAGACTAAGGCTTAGCCTCCTCAACCTGAGAGGGCTCTCTCAAAAGGCTT
AATAATATTCATTAAAGACAAAGATGGCTAACTCTTTTATAACTAATGAAAAAAATATGAAGGTTGGAAACACATCAAAC
TAAATCCCATTGGGCTATGGAGTCTAAAATACCTCAGTATAACAATGAACTCAACCTTACATGGAAGTCAGGGCATTCAG
CATTTAAATATTCAGAACATAAACACATATGGGACCACACAGTTTATAAATGCATACAGGAAGTCAGAGCACAATCAGTG
AATTCTGAGTGATTATACATCCATACCACTGTAAGAATTAAGAAAAGGACAACATCACATATTCTGAACATAAAAAATCC
TTCGTGAATCCTGAGAAGAAAAGAACTCTAACTTGTATTACTGAAAATGAGTCTTACATAGGCCAAAACAAGCTTGTTTT
TCATAAAAATTTCCAACCCTTTGTACATCAGATCTTCTTCTATATATAGAGCTCTTTACATAACTGAGATTCCTCCTCCA
GCATGAGGGGAATTCGAATTCTACCTGATCTGACACCTATTGACACTCAAAACTAACTATTAAATGCAAATGACACCTAA
CTAGCAGTCCTAGAGACCTAATACAACTAGGAGTGTAACTCCTTATTATGATTACAACAACCTTATCTAAACATTTAAAG
CATTCTTTGACACCTAACACTCCATGAAGTCGAATTTGATGAAGCCCATAACCTTCCAGCTGGCCCTTGATGACTCATCC
TTTTGTTGTTCCTAGAAACTAGGAGACTGTCCCTTGCTCTGTTCTGGCTGAAAAATAGGTCTTGGGACAGAGCTCATAAC
TTCTCGTAAAAAATGTATTTGGAAAAACTGAAGGAGGATTTTGTGAACCAATCCGTGCTGAACAAAAACCTCTCTTGGTT
TTTTGAAACACCACTCCAACCGCCCAGAATGTGTCTTTGAAAAACAGGTGTAAAACAGAAAATGAAAAACTGCACCTACA
GCAGTTTCGTAGCGCAACTTTGGTCATTAATTTCTCTCAGATCGTAATGGATTTGAGGAAACTGAAGGAGGTTTTTGTAG
TTCAGTCTGTTAGGAAGAAAAACCTCTTTCAGTTTGAAAAATTGAGTTTTCAGTTGCTTTAGAGACCTCCTGGAAGTTGA
CTAGTAAACACAGAAAGCAAAGTTTTTTATGCTGAAACAGGCTGCTACAGGGGTTTCGCAGCGCGCTGCGAAAACACTGA
TTTCGTAGCGCAAAACAGGATTTTTACACTGTCTGCGCTACGAAAACGTGGATTCATAGCTAGTTTCAAAATTTCTCCAA
AATAATGTGAGATATGACTTCTAAACTCATGGTGAGGCTTCTAGGACATGGAATGAGGCTATCAAACTTTATTTGAAGAT
GGACATGAGACTCTAACCCTATGACTTAGACTCTAAAACATAAAAATGACTTGAGCATGACTTGACCATGACTGATACAA
GAATTGAGAAACCATGTAAGTTGTCCAAACTTTTTAAGGAAGTTTTACAGTGATAACAGTGGCTCCACTAGGGATAGTGT
GCCCTTGTGGTATACTAAGAACTCGCAGGTCCAGT
seqclust/clustering/clusters/dir_CL0033/CL33_tmb.png report 0.791 0.817 0.0786 25239 339000 27.200 0.61% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.19% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.00% Class_I/LTR/Ty1_copia/Bianca:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
64 64 0.290 0.290 17737 0.0611 5120
TGTTCATTGTTGCAGTTGGAATTAAATTCCAACACTCCCCCTTAATTTCAACTGCTGGGTTATCAGTCATACCCAGACAT
TTCCTCAAAAATTCAAAACTTTTCTGATCCAATGGCTTTGTCAAGATGTCTGCAACCTGTTCTTGAGTCCTGCAATGTTC
TAAAACAATTTCTCCATTGTTCACCAATTCTCTGATGTAGTGAAACCTTGTGTCAATGTGTTTCGTTCTCTTATGAAACA
CTGAATTCTTTGACAATGCAATAGCTGAGCTATTGTCACAAAAAATCACTGTTGCTTTTGCCTGCTCTTGGCCTAAGCTC
CTCAACATTCTTCTCATCCAAACTGCTTGACATGCTGCTGCTGTAGCTGCCACATATTCTGCCTCTGCTGTAGACAATGC
TACAATGGACTGCTTCTTAGAAGCCCATGAAATGGCTCCTGAACCCATGTGAAAAACATAACCGGAAGTGCTTTTCCGAT
CATCTACACTTCCAGCCCAATCACTATCAGTGTATCCAACCAAATCTGAACGTTCTGAGGCAGTATATAAAATGCCAAAC
CTTTTGGTACCTTTGACATACCTCAGAATTCTCTTTGCTGCCTGCCAATGTGCCTCTTTTGGCCTCTCCATGAATCTGGA
AATTAAACTAACAGCATACATTATATCAGGCCTAGTTGCAGTTAAATACATAAGGCTGCCAACTATGCTCTTGTACAATC
TAGGATCAAAATCCTTGCTGCTGTCCTCTTTGCTGAGTTTTAATCCCATTACTGTGGGAGTGATTGCTGCCTTGCATTCT
TGCATGTTAAATCTGCCCAACACTTCATTTACATATTTTGCTTGAGAGATAAAAATTCCATTTTCATTTTGATCTACTTC
TATTCCTAAGAAGTATCTCAACAAACCCATGTCAGTCATTTCAAATTCATCTTTCATGACTGATTTAAAATTCTCAATGA
GATAATCATCATTACCTGTGAAAATAACATCATCAACATATAAGACAACAATTAAAATTTTACCATCCTTTTCTTTGATG
TAGACTGTGGGTTCTCCCTCACACTTGTCAAATCCATTCTCCAATAGATAGGAATCTATCCTACTGTACCATGCTCTTGG
CGCTTGCTTCAGCCCATAAAGAGCTTTCTTCAATTTGCACACTTTGTGCTCTTGGCCTTTCTTCTCATAGCCTAGAGGTT
GTTCAACATAAACCTCTTCCATTAACACTCCATTTAGGAATGCTGACTTCACATCCATTTGGTAAACTTTCCATTTGTTT
TGTGCTGCTATGGACAACACTGCTCTCACGGTTTCCATTCTTGCAACCGGTGCGAAAGTCTCCTCATAATCTCTCCCATA
CTGCTGCTTGTATCCTTTGACAACCAGCCTTGCCTTGTGCCTTTCTATCTTGCCTTCAGCATTGCTCTTGGTCTTGTAGA
CCCATTTAACTCCAATGACTTCTTTGCCTTTTGGTAGCTCAACCAAATCCCATGTTTTGTTTCTCTCTATGGCATTCATC
TCCTCATCCATAGCTTCTATCCATTTCTTATCTTTAATTGCATCTTCGAAATGAATAGGGTCATCAACATGACAATACAA
AGCAAATAAGGAATTCATTCCTTCATCATAAATGTCACTTAGATTTCTAAACTTCTTACCTCTTTCATTTGGTGTGCAAG
TGCTTGAAGATGCACTTGAATTTCCTCCTTGTGGTGTGCTTGGAGAAGCACTTTCATTTCTCCTCAAGGGTGTCCCTTGC
TGTCCTTGTGTTGGTGCTGCTGTTTGGGGATGTATTTCAGCCATCTCCTCATCATCTTCATCATGAGACAAACAGTTTTT
AACATTCACTGTTTTCTCTATGCTTCCATCCCAAGCTTCCTCTTCAATGAACTGAACATCTCTGCTGACAAAAAACTTCT
TGGTGGATGGATTATACAGCCTGTATGCTTTGGATTCATCACTGTATCCAATGAAAATACATTTCTCCCCTTTGCTGTCC
AACTTCCTCCTTAGCTGATCTGGAATGTGTGCATAGGCCACACATCCAAAAACTCTCATGTGGGTGACTCCTTGCTTTCT
CCCACTCCATGCTTCTTCTGGCACTTTGTTCATGACTGCTTTTGTAGGACACCTATTCAAAATATAAACTGCACAATGTA
CAGCTTCAGCCCAATAATCATTTGGCAAATGCTTTGCCTTCAACATACTCCTCGCCATATCCATGATGGTCCTATTCTTC
CTTTCAGCAACTCCATTTTGCTGTGGGGTGTACCTAGCTGTAAACTGCTTATGAATTCCATTTTCTCTACAAAAACGTAG
GAATTCCTTGGAGATATACTCACCTCCTCTATCAGTTCTCAAAACTTTGATATGCAGCCCGCTTTGGTTTTCCACAAGTG
CTTTGAAATTTCGGAATTTCTCAAACACTTCACTTTTGTTTTTCAGGAAATATACCCAAGTCTTTCTTGTAAAATCATCA
ATGAATGTTAAAAAATATTGGCTGCCTGCAAATGATGGAGTTTGCATTGGTCCACATAAATCTGAGTGGACAATCTCTAA
GGGTGCCTTTGCCCTTATGCTTTTCCCTGATGGAAAACTTTCTCTATGTTGTTTGCCCAAGATACAACCTTCACAAAGGC
TGTCCGGTTTCTCTATCAATGGTAATCCTCTTACCATTCCTTTTCTGCTCAACAAGTTAAGACCTCCAAAATTGAGATGT
CCAAATCTCAAGTGCCACAACCAATTTTCATCCTTTGGCACGCTTTGGAAAGCCTCTTGGGTGACTGCTGCAATTTCTTC
TTTGTTTTTCAAATCTGCCCTTATTCTGAGAGGGAACATCCTGTTCCTTGTCATCTTCACTTCAGCAATGCATCTTTTGC
TGGGTGCTATATCCATGATGGTGCATACATCATTTTCAAAGAAAACATTGTAACCCTTTTGAACAAGCTGTCCAATACTC
AAGAGGTTACATCTCATTCCAGGAACATAATAGACATCTGCTATGGTTTTCTTTTCTCCTTGCTTTGTAAATATTTTTAC
TTCTCCTTTTCCCATAACAGAAACTTTACTATCAGTTCCTAGTGTGACTTCTGATTTCACATTCTGATCTAAGGCAGAAA
AGAGGGCTATGTTTCCTGTCATATGGTTGCTGCAACCTGAGTCTAAAAACCATATGTCTTCACTATGTGTTTCAGCCATG
TTACAAGCTAACAAGACATTATCTTGACTGATGTTTTCTCTAGTGACATTTGCATTTTGTCTATTATTCATATCATGCTG
CTTCTTCCTACATTCACTTGCATAATGCCCATATTTTTTACAATAATAACATTGGACATTGGATTTTTCATACCTTTGTC
CTTGAGCATGATGTTGTCCTCTTTGTTGGCTGCTGCCTTGGCCTTGGTTCTGATTTGGATTGCTGCCTCTTCCTTGAGCA
TTTGCTGGACTGTTCCTTCCACCTCTGTTTTGGCTTCTGCCTCTTCCTCTCTTGTTTCCTCTGCCTTGACCTCTTCCTCT
TCCAAAGGACATCTGGGTCTTGAAGGCTTGCTCAAGAGATGAGTTTTCATTTCTACTCAACCTCTGCTCATGTGTTATCA
GTGATGCATGTAGCTCATCAACTGAAAAGTTTGAGAGATCCTTTGTCTCTTCTATGGTGGTGACAATCACATCAAACCTT
GAGGGTAAGACCCTCAATATTTTCTCCACAATCCTCCTTTCTTCAAGAATTTCTCCATGAGATCTTATTTGTGTGACCAG
ACCAATCACATGAGTGAAGAATGAGTCAATATTATCTGACTCCTTCATGCTCAGATTCTCAAAATCTTTCCTCAGCAACT
GTAGTTTTGCTGTCTTCACTTTCTCCATGCCTTGATAGGCTGTCTTGAGAGTTTGCCATGCTTCTTTGGATGTCTTAGCT
GCTGCTATCCTTGGAAACACACTCTCATGCACTGCTTGATACAAAAATAAAAGGGCTTTTGAATCCTTCTTCTTATTGCT
CTTCAACAGATCTTTCTCTCCCTGAGTTAATGCATTAAACTCATTTTCATCTGCTGGTTCTTCAAAACCATCTTCAACTA
TTTCCCATAAATCTTGAGAGGCAAACAAGGCTCTCATAGTTATTGCCCAATAGTCATAGTTTTTCCCATTAAACTGTGGG
AGCTGGGTATTAAACATACCCATACCAGTGCTTGTGCTGGCCATTCCTTGACTGTGTATTTAAAACAAATCACTGCTTCT
TCAGCAACACAAAAAAAACTTTTGAAATACCTGAATCCTTTGATGTCTGAGTCTTCTGTCTGCCTGAGAAGTTTTGCTGC
AGCAACAACCTTCTCCCTTCAGCTTCTTGAACACCTTCAAGAGCCTAAGCCTGCTCTGATACCACTGTTGGGTATTTTTC
TGGTAAAATCCCAAAAACACAAGATTCAAACTAAACACAGAGGCAATGCTCTGTTTTACCTCCACAGGATCTTTTTGTGC
ACAGGAAGACTTAAAAAAAAAATTCACTGAGAAACAGAGTATTTCACCACCATAAAAACATTTCTATTCATTAAAACAAA
ATGTCTGATACAAACTTCATCCTCTTTCACTCAGAGGGATTTACCAAAAACAAATACTCTGCCTCTTTTACAAATGATTT
TTACACTGCTGTGTAAAATCTCCATTCACATTTACTGGTGTAAAACACTTTTACATGCTGTTTGTAAAAACAAAAACTTA
CAGAGTTACAAAACTCGCTCAACCATTTCCTTTGTGCACTGCTGTGCATTTCACTGTTCTGAAATTATTCTTCTTCCTCA
CGCTGCTGCGTGCTCTCCTCTGCTCTGTGTGATTCTTCAGCTGCTGCTGCCTCTTCTACTAACATTAAAACAGAACTGCT
GTGCGGTATTTATATGCTGAAAGATATCTGATTAAAACAATAAAATATTACAAAATATCTTCTAATGTTTATCTCAGAAT
TTATTGCAGCAAGGCGGTGATGCCTTTATCAAAAACAAGTCGGCTGTCTGCAGGGGAAATCAACTCAAACTTTAATGCAT
ATTAATGTCCAGAAATATCAAAGGCGACTTGGCTGCACCGAACACCTTTAACATTTACTGCAAATCAGATTCCTGTGCAG
C
seqclust/clustering/clusters/dir_CL0064/CL64_tmb.png report 0.836 0.824 0.3930 17737 445000 4.710 10.76% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
9.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
6.99% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
4.43% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
3.77% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
1.95% organelle/mitochondria
1.29% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.74% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.34% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.30% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.16% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.13% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.07% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.06% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.01% 45S_rDNA/25S_rDNA
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
119 119 0.190 0.190 11787 0.1010 5460
CTGCCCGGAGCACCACCCCTCTGGCTCGGCGAGCCACTGCTCACTGACGGACCTGACATCCTCATAGATGTACCTCCGGA
TCCTCCTGATCCCTGCCCACTGGATCCCTGCGACTGACTCAACTGCTGCTGAGGGTCTGGCTGATCCAGATACTCTAACT
CCCGTGACCTCCTAAAGGCCCTGTCCTCCTCGAACTTCACATCCCGTCTGACAACAACTCTCCTCTGTGCAGGAATGTAA
ATCCGAAAGGCCTTTGAGGTCTCACTGTAGCCCACAAAGATACCCTTCTCTGCGGTGGGCTCTAGTTTGGTCCTCTTCTC
CTTGGGTATATAGGAGTATGTAATGCATCCAAAGATATGAAGATGACCAATATCAGGCTTCTTCCCAGAGAAAGCCTCCT
CCGGAGTCATGTGCCCCAAGGCACGATGCGGACTCCTGTTCTGCAAGTAAACAGCTGTGTTGCAGGCCTCTGCCCACAAG
AACAATGGCAACCCCTGATCATGTAACATGGCTTTGGCAGCCCCTATGATGGATCTGTTCTTCCTCTCCGCAACCCCGTT
CTGCTGGGGGTTGTAAGGAACAGTGAACTCCCTCCTAATGCCTGCCTCCGCACAATAGTCAACAAACTCTCCAAGGGTGT
ACTCTCCTCCATTGTCCGACCTCAAGGACTTGATCTTTCGACCTGTCTGAGTCTCCACAAGAGCTCTGAACTCCTGAAAC
CGCTTGAAGACCTCACTCTTGGTCTTCAAGAAATAAATCCAGGTCCTCCTGGAGTGATCATCAATGAATAAAACATAGTA
CTCATATCCACTCAAGGAAACATGAGACATCCGACCGCTCACATCGGAATGAATCAAATCAAGTATCCCCGTCGCTCTGC
TGTCACTGCTGGGAAAAGGGGATTTGGCAAACTTGCCCATCGCACAACCTCTGCAAGTATCAAAGTGATCAGTACTGAAA
TCTGGCACACCTGTAGTGATCTCCCGCAATGTCCTCAAGGCTCCATGATACATATGTCCCATCCTGCGGTGCCAAATCTC
ACACAGCTCAGAACTGCTAGCTCTGCTGTCGGTACTACTGCTCAATGCCAAAAGGGGCTGGAATGCAAACTTGTACACCT
TTGCATGGCGTACACCTATCACTCTAGCTGAATCAGCTGGAGTGCCCCTGGGATACATCAACACCTGTCCTCCCCTGAAC
AGTACCTCATATCCTCTGTCCTCCAAAGCTGAGACGGATATGAGGTTCTTCCTCATCCCTGGCACATAAAGAACCTCTGA
CACCTTCAAGGGAGGTTTGGACTCCCTCTGAAATGTCACTGTCCCCACCCCGACTGCTCTAACAACTCTGTCATCACCGA
GTACTACCTCAATATCAGTGCCACTCTCTGAAAGCTCTGAGAAGTACTCACGGACTCCTGTCATGTGACGTGAAGCCCCA
CTGTCCACATACCAGATACCTGAAGATGCTCCGCTAATCGAGGGAAAAGCATGCTCCCTCTGAACCTGTGTGGCAGGTGA
TCCTGCACTAGAGGACTCACACGTAGTGAACGCAAACTCCCGGTCAAAACGACCTGCAAAGTCCTCAATCTCTGCTGAAG
CTGCCACGTCCTGGTTCTTCCCCTTCTTCTTCTTCTTCTCCGGACACACAACTGCATAGTGTCCCATCTTTTGACAATTC
CAACACTTCACCTTGGAATAGTCCTTCTGTGTGTTCCCCTGTTTACCTTTACCTTTGCCTTTGCCCCCACCACTGCTTGT
GGAAGCCTGCTTCTTCCCTTTGCCTTTCTTGCCTCCTGCCACCAGTGCTACATCCTCATCCTGCTCAACTGGCTTGGCTG
CCCCAAGCTGACCTTTCCTGATCTCTGTCTGAATGCAATCATCCCAAAACCTCTCCCATGTGGGAAGGGTCTCACGTGCA
CAAACCCCATCAGCAAAGTTCAACCATGAACGGGGGAGGCCATTCACTGCAATCCGCACCAACTCAGTGGGTGGAATGGC
CTCTCCAATCGCTGCCAACTCATCTCTCACATTAGTAATCTTTGTGAGATATCCAGCTGCACTATCATTACCCATCTTAA
TGTTCTTCAGCTTCTCCTTCAGGACCATCTTCCGGTTCTCATTGGTACTCTGGTAGAGATTGGACAATGCTGTCCACATC
TCATGGGCATTGCTCTTTCCTCTCACATGAGGAATGCAATGGTCTTTGATTCCGTCTAGAATCAGCCTCTTACCCTTGTT
GTTCTTTTTATTATACTCAGCCAACTGAGTAACATCAGTGGGCACAACAACAGGGTTCTGTGTGGTATGCACCATGATAT
CCCAGACTTCTGCCTCCTCAAAGATACTCTGCATTCTCTCCTTCCAAACGCTGTAATTTGTATGCCCATCCAACCTATCC
TCCACCCTCAATCCCAATGACATCCTGCTGTCCTAAAACTGAAAAATAGCACTGCTGTAGTAAAGATAAAACTGTTGTTT
ATGAAAAAATCAGCTTGCTGGAATTTTCTGAGTGAAAAATCAGCAACTGTAATTTTTCCTTTTGCTGTCCCAAACTGCCC
TTCAGCACTCAAGCTCTGATACCATGTAAAAATTTCTCATTTCCCACCCCGGTTTTCAGTTTCACCTTATTTCTCCCATG
TAGTTAAATGCCCATTCCCATAACCATACATTTAACAGACTGAAAAAAATAAATATTGCTGAAAACACAAATTCTGGAAA
TTTTTCAGAATGCTGGAAATTGCAGAAATAAAAATCAGCAATTAAAAACAGCCATTAAAACACATTTAAACACTGAGATT
TTTGGTCAACTTGACCCTGGAAAAACCCCCTACAACTCTTGGGGAAAACCAGTTTGAGAGCTCTTCTTTATTTCTGAAAA
TTGCCTTTTTACAGTGAGAATTATTCAGCAAAAAATCAGCAAGCAAATTTACAACTTATCTCCTTTCCCGTGCCTCACAG
CAATCTGGAAATTACAGCAAACAGGACAGCAATAAATGTTGTACGACCTCCGTTTTGTGTGCAGAAAAATCAGCAAACTG
CTCCTCGATTTTTGTGCAAAAATCTGCCTTTCACTATGTGCTGAATCAGCTGTACAAATCTGCTCAACTGCTGCCTTGGA
ATGTGTGCCAAGCTGCTGTCTCCTTCTCCTCCCTGCTCAGAAATCTCTCTTGCTCTCTTGCTCTCCTTCTCCCAATCTGC
TCATGAAAGAATGAATGACCTTTTCCTCCTTTTCCTCCTTTAATATAACCCCAAGTGACTTTTGGGTGATCCCTAAATCC
AATGGCTGAAATAGATTTAGATCAATGGCTGAGATTAAATGCTCATTTAAATCTCACTTTCTATTTTTTAATTCACCCCA
CTTTAATAAAGACCCACTTAGTCATTTATTTCCAAAGTCACTTTTCCTTTCTAATTTTTCATTGACTTTATAAAAGTCAC
TTTAAAATTAGACTTAGTAACTTTATCACTTAAAGTCACTTTTAAATTAGATTTAACTTTATAAAATTATAAAGTCACTT
TAGGAGAAAAATTAAATTCTTTTGGACACTTTTCCCTAGGCCAAAGATCAAAGCCTAAGGGAACCACCTGTCCTCCGGTA
CCAAATTTCAACACTCCCTCTTACCGAGGAAGGTGTTCCTCACCACACCCATCTTGTCTCTGAAGTAGACATGCTTGCCC
CGTGGTAAGGCTTTGGTAAGAATATCTGCAACCTGCTCATCAGTGGAAATATACTCAAGCTTCACAGCTCCCTTCTGAAC
ATAGTCTCTGATGAAATGATATCTGATCCCGATATGCTTTGACCTGTCATGAAATACTGGATTCTCCGTGAGTTTAATGC
AACTCTGATTATCACAGTAAATCACTGAAGGTCTCAACGGCTGACCAAATAAGCCAAACAACATCTTGCGAAGCCAGATG
GCCTCACAACTAGCTAGACTGGCTGCCATATACTCTGCTTCCGCTGAACTCAGTGCTACTGACTGCTGCTTCCGGCTGAA
CCATGACACTACTGCTGAACCCAACCCAAAACAACACCCTGAAGTGCTCTTCCTATCAGAAGCACAACCTGCCCAATCAG
AATCAGTGTATCCTGCCAATCTCACTCCATCTCCCTGCCTGTAGTCCAGACCATAATCCACTGTCCCCTGCAAGTACCGC
AAAATGTGTTTTGCAGCCACCCAGTGAACCTTCCTAGGCTCACACATAAACTGACTCATCGTGTTGACTGCAAAACAGAT
ATCTGGTCTAGTGTTGACCAAATACATCAAGGAACCAATCAGCTGCCTGTACAATGTGGGATCCACCAACTCGGAATCCG
AAGCATGAAGCTTCTTCCAGTTGGTGATCATCGGTGTCGACATGGGTCTACAATCCTCCATGTGGAATCTGCTAAGGATG
TCCACAATATACTTCCCCTGCCCCAGGAAGAAATGCCCCTCCTCCTGCCACACCTCCAAACCCAAAAAGTAATGCATCAA
GCCGATGTCCTTCATCTCAAACTCCGCCGCAAGATCTCTCTTGCAGTGCTCTATGAGTCTCTCTGCACCTGTAATGATCA
AGTCATCCACATACAGCACCAGAATGAGAGGCTCCTCACCAATCACAATAAAGTAAAGGTTCGGATCTGCCTCACTCTTT
GTGAAACCCATCCCCTGCAAGTATGTATCTATCCTGGAGTACCAAGCTCTGGGAGCTTGCTTCAGGCCATAAAGGGCCTT
CTTCAATCTGCACACATGGGACTCCTTCCCATGCACCTCAAAGCCCTGTGGCTGCTCAATGTACACCTCCTCCTGTATGA
AGCCATTGAGAAATGCGGTCTTCACATCCATCTGGTGGATCTTCCAACCCATCTCTGCTGCTATCGATATAATGGAGCGG
ATCGAAGTATATCGAGCCACGGGAGCGAAGGTCTCCTCATAATCAACTCCCTCTACCTGGGAGAACCCTCTAGCCACAAA
CCTCGCTTTGAATTTCTCAATGCTGCCATCTGCAGCATGCTTTACCTTGTAAAGCCATCTGGAAGTAACCACGGATTTGC
CCTCAGGCCTCGGCACCACCTCCCAAACATCATTCTTCATGATAGAAGAATACTCCTCCTGCATGGCCTCTCTCCAGACC
TGCTGGCTAGCTGCCTCCTCATAGCTAGAAGGCTCAGAGTCAAGGATGCTGGTAACCATCGCCATATAGCTACAAAACCT
CTCAGGTGGTCTACTCTCTCTGACCGGCCTCTTCGGCTCAGCAACAGATGTGGCATCTCTCAAGGTGTCCTGAAGCCACT
TGGGCTTCCTCTTCCCTGAGCATGCTTCTCCCATAGGAGAATGAAACTCCTCCTCCTCATCACCATCAGTAGCCTGAACT
CCTGACTGTCTGTCTGCTGTCCTCCTGCCTGCACCTGAACCTGTAGAAGCTGAGGTACCGTGTGAACTGTCCATCAGTGG
ACTCCCTAGTGAACTGCTCTGCATG
seqclust/clustering/clusters/dir_CL0119/CL119_tmb.png report 0.893 0.835 0.4800 11787 593000 52.300 10.04% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
6.89% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
6.29% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
1.75% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.92% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.75% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.73% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.68% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.65% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.52% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.48% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.39% organelle/mitochondria
0.32% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.27% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.15% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.10% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.06% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
173 173 0.130 0.130 7605 0.0473 5020
AGGTTCTCATGGAAGGGCCTCAAGGAGGACGTACTCCAGCACATCCGGGAGTGCGATGTTTGCCAGAGGAACAAGGGGGA
GATGAGCCATCCCGCAGGATTATTGCAGCCTCTTCCCATTCCGGAGGGGAAATGGGAGAGTATTTCGATGGACTTCATCA
CAGGGTTGCCCATGGTACAGGGCAAGGATTGTATCTTTGTCGTCGTTGATCGACTGACAAAGTACGCACATTTTTTTGCC
ATATCCGCACACTACACAGCAGCACAGGTGGCCGAGCTGTTCTTCAGAGAGATCTTCAGGCTACATGGTCTTCCTAAGAC
CATCGTCAGTGATAGGGACAGCCGTTTCATGGGCGGGTTTTGGCAGGAGCTTTTCCGGTTGGTGGGGACGGAGTTGACAC
CGAGTACCAGTTATCACCCACAGACGGATGGGCAGACAGAGATAGTTAACAAGTGGCTGGAGGGCTACTTGCGTAACTAT
GTCAGTGGGCAGCAGCGAGCATGGCTGAAGTGGCTGCATCTGGGGGAGTACTGCTACAACACTTCACATCACATGTCCAT
TGGTATGTCACCATTCTATGCTTTATATGGGTATCATCCTTTATCTTTTGCTGACGTGATGTTTGGTGATAGCAAGGCTC
CGAGAGCCAAGATTTGGATCCAAGAGAGTCAGGATATCCTCCGAGCTCTCAAGGATAACATGGCTACAACGCAGAACCAG
CAGAAGCTGTATGCCGACAGGGGTCGGGTGGAGAGACAGTTTGAGGTAGGGGACATGGTCTACCTACGATTACAGCCATA
CCGACAGTCGTCACTGAAGCAGAAGGGGGCTGAGAAGCTCAAGCCCCGCTTTTATGGGCCATACAGGGTGATACGCAGGA
TTGGACAGGTTGCATATGAGTTGGAGCTGCCCCAAGGCAGCAAGATTCATAACGTTTTTCATGTATCATGCCTGAAGAAG
GCATTGGGGCAGCAGGTGACAGTGACAGATGAGCTACCACCCATGGATGATGAGGGGCATTTGGTATTGCAGCCAGAGGC
TATCATTGATACCAGGGAGAGGCAGCTGCGGAGCAGGACGGTCCGGGAATTCTTGGTGAGGTGGAAGAATTTACCGGATG
AGGATGCCACTTGGGAGAGTGAGAAGATCTTGCAGCATCCATCACTTCAGTTGCTTGAGGACAAGCAACATTTTGCCGGG
GGAGACTGTAATATTCCTAATTAGCCATGGCTAATTGGAATATTCGATTTTGCTCAATTTTGCCTTCTATAGTTATTTAT
AAATAAAAAGTGAGGAAGGGGGACATAACTCACTTTTAGAATAAAAGTCACTTCCTAGTAGCACAACGTTGTGACTTAAA
GGGGAGCCAAGGGGGCCAAAGGGGGACGCAGAAATGGGGCCCACGCAGACACATGGAGGGACTGCGCAGATGGAGAAGAA
CACATGGCAAGAGGGGAATCACGCAGGAGGAGGTGAGCCTTGGGATTGAGAGAGGCAAAGGCTATAAAGGAGAGAGGAGC
CTCCTCATTTTGGCATTCGATTATGTGCATTTGAGCTAGTCACTTCGACTTAGAGCACGCTGGCTGTTTAGCTAGTCTGC
AGCACTGTTTAGTGCATTGAGTGTCTCCGTTCGGAGATCTCACCCTTAGCCCCGGGGGACTTCGAGTGCCTGCTCGGGCA
AGGTATTTCCATTGGCATTTCAGCAGTAGTTTCATCAGCATTTCAGCAGCAGTTTCATCAGCGTCTTTGAGGAACTGCGC
AGAACCCCAAGGGGGTGATTTTCGGGGGTCGGCCATTTCAGAAAAGCTTTCTGGGTTTTTCTGGGTTTCTTGAGTAGAGT
CTGATTCCAGAGTTTCAGCATTTTCTGAGGAGGGGAACAGCCCCAAATCCTCATTTGATTCCAGCAGTAGCAGCAGCACA
ACAGTTCTCCAGCAGCTTGGACGCAGTTCAGAGAGAGGCCATTCCTTTGCTATTCTGAGTGTATTTCTTCACTTGCCTTG
TGCAAGTCGAGGTGCCATCTTTCTGATCACCTCCTGTACTCATTCCATTACTCAGTATAATAAAATGGCTTAGCATTTCT
CTCTGCATTTCTTGAGTATCTGCTTATATTTCAGGTTTACATTATTATATGTTGTTCCACTGTTATTTTATCACTTCTGG
GTTATTATATCATTTGCACATATTTGGTTGGAGTTTTTGCTGGGGTTTGAGGAATATTCTGGGTTAGGAATATTACAGTG
GTATCAGAGCATAGATCTGGCTCAGCCTGTGGAGCTAGCAATCTATGACACCGGGGGAAAAACCCTACATCTGTTACAGA
GGTAGGAGATACAGAGACACTGGGCGTAGGTTGGAGAACACCTACGGAGAGGGAGACTGTGTTCCGGTGGTGGACGCAGA
ACAGGAGGAGCCTGTGGTGGACGCAGAGCAGGAGGATCCGATGGCAGATGAGGACGGGAAGAGATTTGCGGATATGCTCC
TCAAATCAGTGCAGGATCTGTCGAGGCAGATTGAGGTGATGGGGCAGAGATTCACGGCAGTAGAGGCCAGACAGCGTGAG
AGCCCACGGGTTTTCCAGGTTGGTGAGGGATCGGGTGCATCCCACCATTTGCCAGAGCAGCGTGATACTGCGCAGCAGGT
GGCCTCACATGCCCCTACACGCTCTACCATGCCCACTTTCTTAGGAGCAGACACGGGGGCCGGAGCCCAGCAGGAGGCAG
AGCCCGGACATATGGGCGATTATTTTGCAGAGTACCAGGCCTATGGGCAGGAGTTCAGGGATGCTCTCTCATTCAGAGAC
TTTGTTCAGCTCCAGCGGGATAGTAGACCCCGCGACCATCACAGAGGATACCGGCATTACCATGATGGTGACACCCACCG
TGCAGCTAGTAGATTCCACTTGCCTACGTTTGATGGCTCATCAAACAGTTCGGCAAAGTCTTGGGTGGAGAAGCTGGACA
TTTATTTCCAGCTTAACCAGATGTCGGAGACAGAGGCCATCAAGGTGGCAACATTGCATTTGGATGGTGAGGCCCAGGAT
TGGTGGTTTCATGGGATGGTTACACTCGGGCACTCCACAGTGACGACATATGCCGAGTTTACCAGGAGATTGATGGAGCG
ATTTGATCGGAGGGATCCAGAGCAGCATTTTGTTGAGCTGACGAGGCTCAAACAGACAGGGAGCCCAGAGACCTACATTG
CAGATTTCTTGAGGGTCTCAGTGATGGTGCCAGATCTATCCACGGCACGGAGGATCTACATGTATGTTGAGGGGTTAGCA
GAGCCACTTCGGGGTCTAGTCAGATCCACTAGACCAGCCACACTCCAGGACGCTATTAGCAGGACCCGGGACTTACAGGA
TGTCTTACCCAGGACCCGGACACCTTACCCCCAGAGACAGACTTTCCAGCCTAAGGGGAAGGATGTGAGGATTCCGCCTC
CAAAGGGGAATCCAGGACGAGTACAGATTGATGATGATGCCAGGAGGGAGCTGAAGAAGAAGCGGTTGTGCTTCACCTGT
CAGGAGCCGTGGGCACCAGGACATAGATGTGCTGCTGGCAAAGCACATTTTATTGAGGTCTTCTCCGAGAGCAGTGGAGA
AGAGGATGACGAGGATGATGTGGAGGCAGGAGATAGCCATGCCATACAGGGACCTTTGCCACCTCCACCACCAGCAGCAG
GTGGTGCATCTTTTGCACCTACCGGAGGGGCCCTTGCAGCATTGCGAGGAGTTCCCAAGTATCTGACGCTACGCGTACGA
GGGACAGTACGTGGCCAGCGAGTATCAGTTTTGGTTGACAGTGGGGCAACCCACAACTTCATCGATGCACAGATGGTTGA
GCGGAGAGGTATACAGACAGAGAGCTTCGATGGGTTTTCAGTCTTGGTCCCAGGAGATCAGACCATGATGTGTGCTCGTT
ATGTTCCAGAGCTATCAGTGACGATGGGCACCTACACACTGACTGACCACTTTTTCGTGGTCGATATTCCGGACACCAAC
ATGATACTGGGTGTTCAGTGGCTTATCACTCTAGGGAAGGTCACGACAGATTGGAAGACCCTAGAGATGGAGTGGGATGA
TGAGAAGACAGGGAGGCATGAGAAGATACGGGGACAACACACATATCCGCCTCAGACTGTTTCGGCTCATCGGATGGAGG
CAGTCTTCCGGAAGGGAGACATAGAGTGGGCAGTGGAGCTGCGTGCATCAGAGGCAGGGACTACAGGGCAGACAGTGCAC
CCAGAGATACAGTCCATCCTTGATCGGTATGCCATAGTGTTTGGGGAGATTCCACCAGGACAGCCACCAGACCGGGGGTT
TGAGCACACCATTGAGCTTGAGCAGGGCATACAGGCAGTGATTACTACCCCCTATAGGCATCCCAAGGCCTATCGGGATG
AGATTGAGCGGGCCATTCAGGAGTTGCTGGCTCTTGGGCACATTCGGCCGAGCACGAGTCCTTTTGCTTCTTCCGTGGTG
TTGGTGAAGAAGAAGGACGGCACATTGAGGATGTGCATTGACTACAGGGCCCTGAACAAGAAGACCCTGAAGAACAGGTA
CCCCATACCCAGGATCGATGAGTTGATGGATGAGTTGAGAGGAGCACGGTTCTTCTCAAAGATTGATTTGAGATCTGGGT
ACCATCAGATTCGCGTGAGGGAGCAGGACATTCCCAAGACCGCCTTCAGGTGTCACTATGGGCACTTTGAGTTTTTGGTG
ATGCCCTTTGGGCTAACCAACGCCCCAGCTACATTCCAGTCCTGCATGAATCACATCTTCCGCAGTCACTTGAGGAAGTT
TGTGTTGGTGTTCTTTGATGATATTCTCATTTACAGCAGGACTTGGGAGGAGCATCTCCAGCACATTGAGACAGTATTGC
GCATCTTGGAGGAGCAGCAGTTCTATGCCAAGCTCTCCAAGTGTGAGTTTGGGTTGACGGAGATGTTGTACTTGGGACAC
ATCATAGGGGTGGACGGAGTGAGAGTCCACGAGGAGAAGATCAGGGCCATTAGAGAG
seqclust/clustering/clusters/dir_CL0173/CL173_tmb.png report 0.796 0.776 0.3410 7605 129000 0.957 13.10% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
6.61% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
5.88% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RH
3.67% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-GAG
1.92% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-CHDII
1.89% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-PROT
1.89% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
1.08% organelle/mitochondria
0.42% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.34% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.32% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.30% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
188 188 0.110 0.110 6506 0.0507 10500
AAGAAAAAGATCAATTCTTTGGGATCTTTCTTTTATTGAAAGAGAACAAACAAAAATAGAATCGGATTTGTCCTCAAAGT
GTTTATCAAAAGATTATCCAATCTCTTGGGCGAAAGAATTATTTACAGAAGATCAAAGATATACAGAAGAGAATTCCTTT
CCTTTGGAGAGGAAAAGATTCATTGAAAATTTTACAAAATCAATTCGCTATTCTTTTTTTTACATATTGCCAATAGATGA
ACCGTGTATGGGTGGTCCTAGTGCTACTAAAAAGCCCATTGAAGATTTCAACTTATCCAAAAGGTTATTTAAAATAAAAA
AAAATGTTTTTTCCCAAGATTTAAGGGATTCAAAATCCTATTCATTAATGAATAGGATAGTTGATCTATGGAAGATCAAA
ACATATTTTGAAATTGAAAATCCTTCCTTGAATTGTGCTATGCGGAGTTTTACTCTGCCTTGGAATCTATTTTCTGCATT
CTGTGATCAAAGCAAAGGAAAATACATATTGCACAAAAATTTTCTGGAAATGACAGATCAATTCACTCTATCAATAACTA
AGCCTAGTCAGGTTCATGATAAAATTTCATTTTTTATTTATTATAAAATGAATCCATTATATGAACTCAACAAGAATGGA
TCGTTGAGATCGGATCGGATCTTCAATCACAGAGAAAAATGGAAGAATCAATCTTTATGGGTCCTACTCAATATTATTGA
TAAAGCGGATGATTATTTAGATCAAATAATCGACAAACAATTGAGCCAAATCGATTCCAAAAATTGCTTGGAGATAGGAA
CTCCCTTTAACAATTATAGAACTGAAGCTTTGGGTTGGTATGAATCAATTAAGTATAACATTGACAACAGGTATTCGAAA
AATTTATTAAATAGATTCTATTTTATAAATAGGCTCAGTCGCAATTTAAAGGATCAAATTAGAACAAATTTTATAGAAAA
TGAAAATTTAAATAATGTAACGAAAGATACAATTGACCGGCATTCATCAAGTTGGAAAAAAATTAAGAGAGAATGGTTCA
ACCATTCTATTATTCGAATTGATAAACATATCAATCGGAATTTGAATGTGTACAAATGGTCCAATCAGACCGAATACTTT
ATGAAATATTTGAAACAGGTTTTTTCTAAAAAAAACTATTTTCAAATAGTGTTCGATCCAATTGAATTATGTACTAATAC
TAATCGAGATTCAATTGGTTGGTCTGTGTTTTTATCCCTTTCTGAAAGTACTGTAAAGATCTTAAACTCGAAGTTCGATA
TCATTTCGAACTTAAATTCTAAGTTCGATATTTTAATTTCGTTTTTTGATTTTGCATTTCATGGGCTCCAAAGTATGAAT
TCTAGACTATTAAATCAGTTGTTAGATCCAATTGGTACTCTAATCGTTCGTTTAAAAAAATTTAAAACCTTTCTTTTGTA
TGACCATAATCTTTCACAAAGATCGAAATTATTGATTGATGAAGGAACAATTGCACCATTTGTTACGAATAAGATACCAA
TTAATCCATTGATTATTGACTTTTGCGATAATGAAAATAATCGCATGGAATCATTCGATAACACTTATTTTTCGACGATA
TCCAACGATCGAGACAATTGGTTGAATCCTGTGAAACTATCTGATCAGAGCTCATTGATAGCTTCTTTTCACGGAGCAAA
TACGCTCCAATTTTTTGATTATTTGCATCATACTCGGCCAAATTATAGGAATAGATTACCTTCTGATATGAAAAGATTTT
ATATAAAAAGGAATAATTTTACATATGGACAATTATTCAATCTTTTGATCATCCACAACAATCTATCTTCCTTGCCCATT
GGTGAAATAGGACCCGTTCACTCAGAAAAAGAGACTATTTCATTCATCAAATCACAAGTATCTAACATATTATTACCTAA
ATATTTAAAACGAAAACGAAGTGGTGACCAAACGTTTGTATTAATCTATGATTTGTACAGATCCTTCAATTTACTAACTC
GATTGAATCCATTCGTTCGTGAAAAGAGATATCTTTCTTCGATCGAAGAGATTTCTACAACGCCTTTAACAAAAGAACAA
ATAGTCAATTTTGAAAAAAATTTTTGCCAACCTTTTTTTAAAAGATCCGATTCAGAAGAAAACAACTTTGATCAATGCTT
TAAAAGGGGTTTCAGTTCAAACGTGGGTCTTATTCAAACTCGATCTTATCAAGATGATTTACTATCCGAAATGTTTTCCA
ATAAGAACGAGGAAATTTTTCCTCGTATTCAAGATCGGTTTGTAACCGAATGTGTAAAAAACAAAATAGTAAACGAAGAC
ATAGATGGAAGGAGTACCCTTTCTAATTCATCTAAAGAGGAACAGAATATTTATAGGATCTCTCAAATAGATAGTATTTT
TTCAAAATGGGATTTGTTCAAAACATATATGCCCTGGTTTTTTACCTCTGCATGGTGTAAATATATTGAAAATATGCTTT
TAGATACTCTTTCGGAGATATTACTACATGGCAGTAATCCATTTGTATCTATTTTGCAAAATATTAAGCATAATATTTTG
CTTAAACGGAATATATTGTGGGAACTCTCTCATCCATTATGGGAACCTATACAATGTAAATTGAGAACGAATCTTATTAA
TAAGTTTTTTTTTCCAAGTAATAATTTCAAGGATTTTTTCCCTTACTGCAAGGATTTTTTAATAGAGGAAACTAGTGATC
GAGAGAAGTCATCAGTTCCATTCATATGGGCACATATGAGATTACTAAATGCTCGGGGGTATAAATATGGGATTCTTATC
CCTTTTTTCGTTCTTGGGTATTCTATTCTTCAATATTTTAAAGTTATTTCTTTCGCCTTTATCAATATAAAGAGATACTT
TGAACTCATCAAGTATTTAAAGCATCCATCATACGTGATAGAGTTGCAAAAAATGATTAATCCTCCCGTGCCTAATAGCT
TTCTCTATTATACAATAGACAGATCCAGTTCTCTTCCACAGATTATTAATAGTTTTTTTTCTAATAGTTTTTTTTCTATT
AATATGAAGAGGAAGACGAAGACGAAGAGGAAGACGAAGAATAGAAATACAAAATTGCTTATAACTATAATAAGAGAGTT
GAACGGATTGTGCTCTAGTATGGATATCTCCGAAAAAGAGATGAACTTACTAGTTCAGTTTCTAATGACGGAAAAAGCCC
TTTTTAAATTTGAATCAATTTTTACTTACAGTCATAATTTATTCAAGAATGAATTTGGAGATCAAATCATTAGACAGCCA
GGGCTTATTCACTTACGATATTTGGCCTACACTTATCAAAAAGGTCTAATTAATTACGGGTTCAATCCATTTTGTTTAGC
AGAAAGATGGGTATTCCTTGCTTTTTGTCAGAAGATTACCTCTTCACAAATATTGTGTCAAACCAACCCCACATTTCATG
GAAAACCTTTCTCACTCCACTCAGGATCATTACTTTCCAAAGGGATTTTACTGATAGGTCCTATGGGAACTGGCCGATCC
TATTTGGTCAAAAGTCTAGCAGCAGACTCATATGTTCCTTTAATAAGAATATCTCTGAAGAAGCTCTGGTATGGTGAGTA
TTTAGATTACCCTCTTGAACGTATTCCTACTGAGTTTGATCCTTTTGTGAAAGACAAAATGGAAGATTTCCATATTACCT
TAGAATTGGCGAAAAGCATGTCTCCTTGCATAATATGGATTCCAAACATTCATGAACTGAATTTAAATGACGCAACTAAC
TATTTATTTGGTTTTGGCTTCACTGACTTGTTCCTTAGTGTATTAATGGACAATCTCTTTAGATTTAGAGATGGTGAAAA
AGATTCTATGAGACATATTCTTGTTATTGCTTCGACTCATATCCCCCAAAGAGTGGATCCAGCTCTAATAGCTCCAAATC
GATTAGATAGATCGATCAATATTCGAATGCTTGTTATCCCACAACGACAAAGGGAATTTCCTATTCTTTTATGTAGCAAA
GGATTATACTCGGGAAAATTTCCCGATGAATTTGGATCTATAACCATAGATTATGCTGTACGAGATCTAGCAGCACTGGC
CGATGAAGCCTTAATACTTAGTATTACCCGAAATAAATCAGTTTCAGTTATAGACACTAATACAATTCGATCCGCTATTT
ATAAGCAAATTTTTCATTTACAATCTATGGATAATCAGGTTGGATCCAGTCAAAATGACGAAATAATTATCTACAAAGTA
GGAAAGGCTTTTATACAAAATACGCTTAGAAGAAATTCTCCCATGAATCCTCTATCTACAAAAAAGGAATTATGGAAGAA
AAGGTTTTGTTATTTGTCCGAATGGTATTTAGAACCTTCGATTGCCGAAACAACTATGAAGGAATTGACCATACTTCCCC
ATATTTTGGGTTGCTTGGCCGGATCAGCGGCTCGAGATTCTTGGTCTATATCAGAACGAAATAGAGAGAATTGGATTCCT
TTCGATAAATTAGCTGAGCATGATCTTGATATAGCTTCTAGTCTTTTAGAAAGTATTCTGGTGGAGTTTCCATTTTCTAG
GTTAGGAATATGTCGGGGTAAGTCCGATAAGGATCAGATCACATTTGCTCCTCAACTCAAAATGAGAGATCATCTAGATC
TGATACGATTTATGAAAGAATATGAATTGAAGTTTACTCCCGGCGCAAAACAAAGGGATATGGATGAAGAATTAATAAAG
AATGTAGTTTGGACTCCTAGGATCTGGCGTCTTAGTTTTCTTCGCAGTAATAGATTCGATCATATAAAAACACCCAATTC
ATTGGGATCTTCGTATCAGTTCGGATCGTTAAGAAAACGGCGGATGGACAGATCTCTATTTCCTATACAATATCCGAAGC
AATATAAATACTCTAAGAAACCACTGTTCTTTATAGGAAGACGATTTCTTTGGGATTCCTTCCTATTTCAAGAGCAGCGC
CCTGTTTTTTCACGCCGAGAATTTTTCGCAAATGAAGAACTGCTGAAAAGGCTTTATATTACTTATGGTGCAAGAAGATT
AATAGCACAACCTGATTTTTTCCCTAAAAAAAGTATCCAAAGTTTTTTTCGTAGATATGATTCAAAATCCACGATCAATT
CGGTTTTGGTCATGAATTGGTGGAAACCATTGTCTCTTAGACATAGACATATCGAGCATTTCAAACGCATTCAAGCGATT
GGTATCCAATTGGAACGTATGCAGCCATATTTTCCTATATATTCATATAACCGTTGGTTGACCGAAAATTCGAGAGAAAG
GATTGACCGCTTCCAATCGTTAATTCATCGCCAAAGATGGCTCGGAACCAATAGGTTATTATCTAATGAATCTTTTCTTT
ATAATACTCTATTCGAGAGTTATCAATATTTATCAAATCTGTTCCTATCTAACAGAATGTTATTGGATCAAATTACAAAG
AAATTGTTGGAGAATAAATGGCTTTTTCCCAATGAAATTGAACACTCAATTCATACAACAGGATTAAGATTTGATATCAG
CTGGGAGAATATGGAATGAAGTAAAAGAAAATTGACCGGGCAGTAGGGTCGTGGGAATCAATGAGAGGTTCTACATATGC
TCCAATTTAAGATCCTATAAAGACTTGATAGATCTTTAATTTGAGGTTCCTCACTCCGAGATCTCGACCATGTAAGAGTA
AGCATAGTCTAATAATATCTCATTAAGTTAACTAGACTATGCTTACTCCTTATTTCCTCGATTTGGGTTCTAGCATTCTT
TTTTTTCCACACTATTTGAAGAGAGGAAAGGATAAGGATAGAGTCACAGGATCCGACATGGATATAGTTGGTGAGGTTCG
GTCGTAACTCCCGTATATTGCAAGATCTTGATAGAGGTGGTATCTGGTCAATCTATGTATCGATCTTCTCAATCTGTGTC
CTTAATGAAATATACCTCATAATACGAGGGTGTATTCGGAATGGACTCCTCATTAGGTAGAGAAGATCTGATCCTACCTG
TGATCCACTGTCCTATTCCAACAGCGTTAACTTGTAGTTAATCGATCGTCGGAATACCTCGTATCAACAGAGAATCTATC
TCAATCTATTGAGATACTCTACGAGATTTGCCATAATATTGCTCATTCAATAAGCATGAGCAATATTATGCCTTGAAGAG
GACTCGAACCTCCACGCTCTTAAGCACGAGATTTTGAGTCTCGCGTGTCTACCATTTCACCATCAAGGCATCCCAAAAGG
AAATTCTATTCCATTCATATATATATATATGAAAAATATCCTGATCTATGAATGAACATATGTTAGAGATAGCGTATTCG
AGTATTGATATACGATTGGTCATATAGGTTCATCATAAAATTTTTTTTATCTGGAGGAGATTTCCTATAAAACAAGACGA
CTGAATGAACATCCTTTCTTTTTAAATTTCAATTCAATAGAAACCTAAAGAATTGAATATGGTACAAAATAAAAAATATT
TTCAAAAACTTTAACTTTTTTCGGTAAAAGTGATGTCTTGGTCCGAGTGGAGGTAGGGGTAACAGTCCTTTTCTTTCTCT
TTTCCACATGTCCATAGAAACATTGATAAAAAAGATAGATATCTATTCAATCTATTTTATTAGAGAGGTAATAATTTGTA
AAATTAATCGCACTTCTTCCCTTCATAAGGGGTCCATTGATGAAAAGAGACTAGAAAAAGTAAAGTTCGGACCCAATTCC
TACAGTTATGGATATAAGCACAATCCAAATTCCGTTATACATTTGTGTATCTATGAGATCATTTACTATTTCTTGAAGCT
AAATCTTTCCCCTGGATAGACCATATAGCCAGAAAGACCATAAACCAGAATGGAAGAAAAGCAAATGAAACTCTTTCAAA
CGATCTCAGGGTATAATTGAAAATGAAGTTTTCACTTTGTACATGTCAGATCATGAATTAGTAATTTATTTCAATCTCCG
AAAGAGTAGAAAAAGTTTCTAACTTCCAAGTTTAGGAGATTTACATAATCTCATGAATAGGATCGAATATTCCTCCATAA
TCTATCTCCTTTTTCCTAAAGGAAGCCTTCCCAAGAGGACTTAGATCTATCTATGATTTATGCTTTTTTCTTTTTATTTT
TTCTCTTTTGTTCCGATAAACATATTGTCCGATCTGAACGGGAATCAATTTCTAATTTATCAGAATATATAAATCCACTA
TATAGATAGGTAGATCTCGATCCTGTTTATGAGTTAACGAAAATGTGCAAAAGCTCTATTGGCTTCTGCCATTCTATGAG
TCTCTTCCTTTTTGCGTATAGCATTGCCATTCCCTCTAGCAGCATCCATTAATTCGTGACTCAATTTGAAATTCATATTT
CGACCCGGACGTTTTCGAGATGCCCCTAATAACCAACGAATGGCAAGTACTTTTCCTTGGGTTGATCTTATCTCAGTGGG
AACTCGATAAGTCGATCCACCCACACGTCTTGCTTTTACTGTTACATTGGGAGTTACTCTACGTATTGCTTGGCGTAGAA
CAGATAGTGGATTTTTATCCGTCTTTTGTTGAATCTTTTTGATGGCTCGATAAAGAATTCGATAAGCCAATGATTTTTTT
CCGTTTTTAAGAATACGGTTAACCACCATGTTAACTAATCGATTATGATAAATAGGATCGGATTTTGCAGTTTTTTTTTC
TGCAGTACTTCGCCGTGACATGAGTGTGAAAAAGGTTCAAGAATCTATTTCATAAAGGCTGAAAATCATTTATTTTTGCT
TTTTTACTCCATATTGTAGGGTGGATCTCTAAAGGTATGAAAGATCTCCCTCCAAACCGTACATACGACTTTCGTCGAAT
ACGGCTTTCCACATTATTATATCTGCATAGATGAGATATATTATTTATGCATATAATTCTGTTTACTCACTCTCAATTGA
GTATCCGTTCCCTTTCTTTCTTTTGCTATGATTGGAAATCCTGTATTTTACATATCTATACGATCAAGTCCTTAGGTTTA
CAAAATAGTGTATAAAAAAGTGTTTCAAATCATTGCTATTTGACTTGAACCCGTTCTAATAAGGTCAAGGTATTTTCGAA
TTTTCTGTTGAAACAATCAGGGAAAACTTCGAAAATGATTTCGATATTAAACCTTGGACATATAATAGTTCCAATGAAAA
ATAAGATCGTGTTTTTTTTTTTTCGCGGTAGCCTGCTATAGTCCCCTTACAAAACGTTCGTTATTAGGTTAGCTATATAC
TTAACATGTTCCTAGCAATTCACATGGCATCATCATGAAATGATACAAGTATTAGATAAGTAAGAATATACAACGCACTA
GAACGCCCTTGTTGACGATCTTTTACTTCGGCAGCATCTAGGGTTCCTCGAACAATGTGATATCTCACACCGGGTAAATC
TTTAACCCTTCCTCCTCTTACTAATACTACAGAATGTTCTTGTAAATTATGGTCAATACCAGGTATATAAGCAGTGATTT
CAAATCCAGAGGTTAATCGTACTCTGGCAACTTTACGTAAGGCAGAGTTTGGTTTTTTGGGGGTGATAGTGGAAAAGTTG
ACAGATAAGTTTTCTTCACTGTCACTCTACAAAACCGTACATGAGATTTGCACCTCATACGGCTTCTCGTTCAATTTTTT
TTTTGTTTCGAAGTAAGATAAATTGGATTATTCTCGTTGTTCGATAATATTAATATTCCCTTCCTTTATACATTATGTCT
CAAAGAGTAACTGGAACCAATTAAGTCAAACACATTTTCGTATTCTAACCAAACACTAATGAATCCTATTTGTCCTTTTC
GGTCAAAAATATTATGCAAAATCTTCGGGATTCCCTCTTCCTTCTCTATTCCCATCCTATAAGTACAGTGCCTGAAGAAA
TACTCTTTTTGTATGATATGAATCGACATTATTACATGCTAATTCCTTCTTGATATCTCGATATATCATTCCTCCAAATC
ACAAATTGGATTCGAAATTGACGGGTTAATGTGAGCTTATCCATGTGGTTATACACTGTTCGAATTTGAACAGGAATCAA
TTTAATGAAAGATCCTGGCTTTCGTGCTTTTGTTGGGGTTGTCCAAGATCATTTCGATGACCTATGTTGAGGGAGATATA
TATCCATATCTATCTGAGATATGATCTGATCGACTGCGTAAGTCCACACGAATAGCAACCGATACAAGGGAGAGTATACG
GAAAAGAAAGTGATTTTTGATCTGATATGATGAACTGATGAACGGCATCAGTCCTATATCTTGTTTCTGTGGACCGGTGG
AAAAGTGAGGGCTCAGCGGGAAGAGGATTGTACCACGAGAGAGCGAAGGGGTCAACCTGTTCCGAATAGACAACATGGAT
TTTGGAAATGTAGTTGTACTCTTACATCGATCCAGATCAAGAAGTATTTCCATCCACGGGGGTAAATATTTGCTCGCTAG
ACGAGAGGATAGCAGTGCTAGTTACAAATTCTGTTCCGGTAGGATTTCACTTTATTTCTATAAAGTAGTTAACGGTTGCA
TAGGGTCTTCTCCTTGGTGCAAGAAGAACAATTTGATCCGTATCATCTCTGTATAATCTTGACTCGATCTTGTTCTCCTT
GTTCTTCCAAACAATATTGAGTTCTTTCCGTACGCACTAGTGCTAGATCGGATCAAACATGCTGATTCAAGTTCATGTAA
AACTTGCTTTATCAAGATAGGTAAAATATTACTGATTTTACGGGACCATATGTTATGATTCGAATCAGTAGGAAATACTA
CTTTCGACAGGATTCACTCAGAATAGGCTCCAATTTTTTTTCGTAGTAGTGTGAAAAGAAGGAAGGTCTGGCTTCAAGTT
GTTCGAGATAAAATAGTGGGATAGTTGTGTTGAGTCTCTCGACCCTTTGGTAAGTTATTATTCATAAGTCAGTTCTCCTT
CCAGATGAGAGTAGGGAAGGGATATAACTCAGCGGTAGAGTGTCACCTTGACATGGTGGAAGTCATCAGTTCGAGCCTGA
TTATCCCTAAACCTAATGTAAGCAATCCATATTTTTTGGTCAAAGGTATAGTAGTACTTACATTATCGATCCTCATATAT
CGCTTCAATCATCAAAGTAGTATGATTGATAGAAAAAATTTCTATTTGATTAAACTCTTTCCTATCCATAACTTTATGGA
ACTTGGAAATGAAACACCGGAAGAATATTTAAAGCCTTTCACTCAAAATTGGTTGAGATTTCCGCATCTTTTACTATCTT
TCCAATTGAAAAGATATTACAATCGGGATTTTGATCCCATTAGTTTAAATTCAGGATATGGCAAGAACACGAACAAGAAG
GATGAGATTATCTCGAAGAATCAAGGACCGAGCGAAACTCATTCGGAAAATGATGAGAAAGATATCAATTTGAAGATCGA
TTCAACTCTTAATTCAACCGAAAATGAGTATTGGAAACCTGAAAAATATCTTTGTGAAGATCCATTCACAAGGAATAAAA
CGGAGATTGAGCAACG
seqclust/clustering/clusters/dir_CL0188/CL188_tmb.png report 0.749 0.937 0.7290 6506 137000 0.000 99.51% organelle/plastid
257 257 0.042 0.042 2534 0.0702 4820
GGCATGAATTTGATTGAAAATGGAGACAACAGTTACAGATATGGAGAAGTTGAGCGGGGCTAATTTTTCCCTATGGAAAT
CACAGATGGAGGATATACTGATTTTAAAGGATCAGTATTTGCCGATTGAGGGCACAACAAAGAAACCCTCATCGATGACA
AATGAAGAGTGGAATAAGCTAGATAGAAAGGCGATTGCAACAATCCGCCAATATTTAGCAAAGAATGTTTATTTCAATGT
GTCCGGAGAAAAGACGGCTGAAGGATTATGGAAGAAGCTCCATGATCTATATGAGAAGAACACGACATCAAACAAAGTGT
TCTTGATGAAGAAGCTTTATAATCTCAAAATGAAGGAGGGTGCTTCAGTTGCTGAGCACTTGAATGCATTTAATATTATT
ACTAATCAACTTGCCTCTGTTAAAATCATTTTAGATGATGAAATTAGAGCTATTTTGCTAATGTGTTCTATGCCAGACAG
CTGGGAAAATTTAATTGTAGCTATGAGCACTTCAACAACTATAGGGACCCTGAAGTTTGATGATGTCAGCAACAGTTTAA
TGAATGAGGAGCTGCGACGCAAGTCAATTGCGGAAAACCAGGGAGGAGAGGCTCTAGCTCTAGCTGATCGTGGTAGGAGA
ATGGATCGAGGCCGGCAAGGGCGATCAAGATCGAGAGGCCGATCAAAATCAAGGAGAGGAAGGATCATCTGCTTTCATTG
TGGCAAACCCGGGCACATGAAGAAAGAATGTCGATTCTGGAAGAAAGGACAAAAGGATCAGAGACCGTCTAGTACAAATC
ACAAGTCATCCAGCACAAATGAAGGTGAGACTACTGTTGTAGCCACAGATGGTGATGTGTTGTTTACTGTTTCAGTAGAG
GATGCATGTGTATATACATCTAGCAGTAGCTTTGATTGGATCCTTGACTCTGGGGCATCTCACCATGTAACCCCATGCAA
AGATAGTTTTGTTTCATATAATCCTGGTGATTATGGTAGAGTGCATTTGGGGAATAATCATTTTTGCAGTATTGTTGGAG
TGGGAGATGTCCAGATCAAGATGAAAGATGGACAAGATATATTGTTGAAACAGGTCAGGCATGTACCAGAAATGCGCATG
AGTTTAATCTCTATGGGACGACTGGATGATGAAGGCTATTCGACAAGCTTTGGAAAAGGAGGCTGGAAAATTAGCAAAGG
AGCATTGGTCGTGGCCAAAGGACCCAAGACAGGAACATTATACACATTGAAGACACTGATAGGAAAATCAGATTTGGCTG
CTGTCACAAAAGAAGGAAATTCAGCAGATCTGTGGCATAAGCGTTTGGGTCACATGAGCGAGAAGGGCTTAAAAATCCTT
GTTGGTAAAAATTTATTGCCAGGTTTGAAATCCTACAATCTTGATCTTTGTGAGCATTGTATATATGGTAGACAAAGAAG
GGTTTCATTCCTTAGAGGTGGCCATGACAGAAAGAAAAATGTGTTAGAATTGGTACACTCAGATGTGTTTGGGCCTGTTA
ACATCAAATCATTAGGAGGAGCATCATATTTTGTAACATTTATAGATGATGCATCCAGGAAGGTTTGGGCATATCCTATG
AAAAATAAAAGTGAAGTGTTTGGAATATTTCAAAAATTCCATGTTGTTGTTGAAAGAGAGACTAACAAATTGCTGAAGTG
TTTAAGAACAGATAATGGTGGAGAATATTGCTCAAATGCATTTAAGGAATATTGTAACAGGTTTGGCATAAAGCATGAGA
AGACTGTGCCTGGTACTCCTCAACAGAATGGTGTCGCAGAAAGGATGAATCGCACCATTATGGAAAAGGTGCGAAGTATG
TTGTCCAATTCCGGTTTGGAGAAGAATTTTTGGGCTGAAGCAGTCAGGACCGCTTGCTACCTCATAAATAGATCTCCAAC
TACAGCCTTGGATGGCGGTATCCCTGAAGAAGTTTGGACTGGTAAGAATTTGAATTATTCTCACTTGAAAATCTTTGGAT
GTGAAGCATTTGTACATATTCCCAAAGAAAATAGAACTAAGCTAGATGATAAATCTATGAAATGCATTTTTTTGGGATAT
GCGGATGAAGATTTTGGTTATCGTCTATGGGATCCAGTCAAACATAAAATTATTAGAAGCAGGGATGTTATATTTAATGA
GTCAGAAATGTTCAAGAGGACTGTAGGTGAGTTGGAGGTCAAGAAGGTTATTGACAGGTTTGAAGAGCAGCAGGAAAACA
TACCACCAATACAAGAAAATGAACAACAAATTCAGGAGCATGAAGAACAACAAGTGGAAAATGATGAACAACAAGAAGAA
GGAATCTTGCAGGAACCTTTACAGGAGATTCAACCTGATAATGCACCACCACAGTTGGTTCGCAGATCTTCTAGGCCTCA
TAAGCCTTCACAAAGGTATCCTCCTTCAAACTATATTTTGTTGACTGATGAAGGTGAGCCTAATTGTTTTCAAGAAGCTT
GTAAAGTTGAGCACAGTAAAGAATGGAAGAAAGCAATGGAAGAAGAAATGAACTCTTTGCTGGAAAATAAAACTTGGGAG
TTGGTAAACCTCCCAAAAGGTAGAAAGGCTCTACAAAACAAATGGGTGTACAGGATTAAGCATGAAGGTGACGAAAAGAA
GGAGAGGTATAAAGCAAGGCTGGTGGTGAAAGGTTTTGCCCAAAAAGAAGGTATTGACTTCACTGAAATTTTCTCACCTG
TTGTTAAAATGTCATCCATTAGAGTCATTCTTGGTCTAGTTGCTGCTTTAGACCTAGAATGTGAACAGTTAGATGTAAAA
ACTGCTTTCCTTCATGGTGAATTGGAGGAAGAAATTTATATGGAGCAGCCAGAAGGCTTCATAGAAAAAGGCAAAGAAGA
CCTTGTTTGTAGGTTGAAGAAGAGTCTCTATGGGTTGAAACAGGCACCTCGACAATGGTACAAGAAATTTGATTCATTCA
TGTTGGAACATGGTTTTCAGAGGTTGGAAGCTGACCATTGTGTCTATATCAAGAGGTATGATCAAGGAAAGTATATCATA
TTATTGTTATATGTGGATGACATGTTGATTGTTGGGCATGATAAGAATAAGATCAATAGGTTGAAGAAAGATTTGGGTAG
CAAATTTGCAATGAAGGATTTGGGACCAGCACAACAGATATTGGGCATGCGGATTATGCGTGACAGGAAAAACAAAAGGT
TGTGGTTGTCACAAGAAAAATATATCAAGAAGGTGCTTGACAGGTTTAATATGAAGGATGCCAAGCCAGTTGGTACACCC
CTTGCAGCCCACTTCAAGCTGAGTACTGAATTATGTCCTAGTGATGACAAGGAGAAAGAAGAGATGAGCAAGATTCCTTA
TGCTTCAGCAGTTGGCAGCTTGATGTATGCCATGGTATGCACACGACCAGACATTGCATATTCAGTGGGAGTAGTGAGTA
GGTTCCTTGCCAATCCAGGCAAACAACATTGGCAAGCAGTAAAATGGATTTTGAGGTATCTCAAGGGTACTAGTCATTAT
TGTTTATGTTTTGGTCATGATGAGACTGTGCTTGAAGGATTTACAGATGCAGATATGGCTGGAGATATGGACACCAGAAA
GTCCACTACAGGTTATTTGTATACATTTGCAGGTGCAGCAGTATCTTGGGTGTCAAGGCTACAAAGAATAGTAGCCCTCT
CTACAACAGAAGCAGAGTACATAGCTGCAACAGAAGCTTGTAAAGAGATGTTGTGGATGCAGCGATTCCTAGGAGAGATA
GGAATAAAGCAGGACAAGTATGTGTTATATTGTGATAGTCAGAGTGCCATTCACTTGGCGAAAAACCCAGCATTTCATTC
AAAAACCAAGCACATTGACTTAAGGTACCATTGGATCCGGCATGTGTTGGAGGAAGAACAATTATCCTTGGAAAAGATCC
ATACAGATAGGAACCCTGCTGATATGCTCACTAAGATTCTACCACGAAATAAACATGAGTTATGTAGAGGCATGGTAGGA
CTCGGTGTGACTTGATGACTCTTATTTGGCTTCAAGTGGGAGAATGTTAAGTGTGAAGCCAAATTCATGCAGGATTCTAG
ATCCTTCTTCTGCCTCTATAAATTTGTAATTTCTCTGGCCAAGGAAAGCAAGCCAAGGCCCAAGCCTGTTATGTAATGCA
AAGTGATTTCTGTTCTCCAGTGATTGTTTTATCTATTCCGCTGTTTCTGATTGAGTAATCTTGTTGTTTCTCCATTTGTC
TGTCTCTGAGTATAAATCCGTTGTGTGTTATGTATGCTCTGGTCTAACAACTGGTATCAAAGCTAGGGTCGAATATCCAC
TGTGCAAGCCGCTTAGTGCCATCGCCTTACTCTGGCAGCGTTCGTTAAAACGTTGGTTGTTACCCCTGGAGCTGTTGAAG
GATCTGTCCAGGAAATAGCTGAGGAACGCTGGAACTAAAAGACAGTTGCTGCAAGAAAAACAAGGTCGTGGACCTATGTT
GAAACATGTTGCTGGAGTTTGAAACGTGGAGATCCGTGGAGATTGGAGTTGAAACGTGGTGTTCGTAAGTTTTTTTTACA
TCAAGCTTGCACGTATACGTCAAGTTTTTTCTCAAACCAACATATGTATGTGTGAAATGTGAAAAGGTTAAAACATTATA
TATGTTTTTATATTTATTATGAAACATATATAATTATATGTTGGAATTTTGAAAAGTATATTTTAAAAAGGAGCAGGAAT
TTTGAAAAGGGTATTTTAAAAGGAGGAAGGTCATTATTACTAAATTTTAAAGAGTAATAATTAAAGTTTTATTTTTAAGT
GGAGTTTTTTGTGTTTTGG
seqclust/clustering/clusters/dir_CL0257/CL257_tmb.png report 0.878 0.823 0.7650 2534 29100 5.160 14.13% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
9.87% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
7.81% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
4.85% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
2.96% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
2.92% organelle/mitochondria
0.39% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.32% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.20% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.12% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.08% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.08% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.08% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT

rDNA

not found

Other

  Cluster Genome
Proportion
[%]
Genome
Proportion
Adjusted[%]
Size
real
Satellite
probability
Consensus
length
Consensus Graph
layout
Kmer
analysis
Connected
component
index C
Pair
completeness
index
P
Kmer
coverage
|V| |E| Pbs
score
Similarity
based
annotation
1 1 0.850 0.850 51293 6.21e-21 seqclust/clustering/clusters/dir_CL0001/CL1_tmb.png N/A 2.48e-02 0.764 39925 6620000 0.01% Class_II/Subclass_2/Helitron:Helitron-HEL1
0.00% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
2 2 0.770 0.770 46825 3.18e-21 seqclust/clustering/clusters/dir_CL0002/CL2_tmb.png N/A 1.10e-02 0.622 39497 742000 0.27% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.19% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.12% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.00% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/Bianca:Ty1-GAG
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
0.00% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.00% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
3 3 0.600 0.600 36366 3.19e-17 seqclust/clustering/clusters/dir_CL0003/CL3_tmb.png N/A 9.17e-02 0.674 36364 5440000 0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
0.00% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
4 4 0.600 0.600 36098 1.56e-21 seqclust/clustering/clusters/dir_CL0004/CL4_tmb.png N/A 5.82e-03 0.688 36098 6270000 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.00% organelle/plastid
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
5 5 0.590 0.590 35919 1.17e-23 seqclust/clustering/clusters/dir_CL0005/CL5_tmb.png N/A 3.67e-03 0.844 35919 874000 24.87% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
13.78% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
11.83% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
7.25% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
0.06% organelle/mitochondria
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
6 6 0.590 0.590 35522 4.34e-16 seqclust/clustering/clusters/dir_CL0006/CL6_tmb.png N/A 1.24e-01 0.656 35522 2220000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
7 7 0.580 0.580 35229 2.62e-19 seqclust/clustering/clusters/dir_CL0007/CL7_tmb.png N/A 3.69e-02 0.599 35225 2310000 9.38% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.22% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
8 8 0.560 0.560 34144 1.44e-23 seqclust/clustering/clusters/dir_CL0008/CL8_tmb.png N/A 1.17e-04 0.835 34144 450000 0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
9 9 0.560 0.560 33984 8.21e-23 seqclust/clustering/clusters/dir_CL0009/CL9_tmb.png N/A 3.53e-04 0.738 33984 661000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
10 10 0.540 0.540 33017 9.43e-24 seqclust/clustering/clusters/dir_CL0010/CL10_tmb.png N/A 2.12e-04 0.851 33017 775000 11.79% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
8.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
5.42% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
4.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
3.87% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.76% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.58% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.57% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.26% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.22% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.19% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.12% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.00% Class_I/pararetrovirus:PARA-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
11 11 0.540 0.540 32696 3.69e-22 seqclust/clustering/clusters/dir_CL0011/CL11_tmb.png N/A 3.76e-03 0.652 32696 1410000 15.96% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
10.54% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
7.23% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.08% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.06% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.01% organelle/mitochondria
0.00% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.00% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
12 12 0.520 0.520 31361 7.64e-22 seqclust/clustering/clusters/dir_CL0012/CL12_tmb.png N/A 3.19e-05 0.597 31361 164000 7.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
6.69% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
4.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.84% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.60% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.41% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.27% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatI:Ty3-INT
0.26% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.26% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.22% Class_I/LTR/Ty3_gypsy/non-chromovirus/nonchromo-outgroup:Ty3-RH
0.15% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.11% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.10% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RH
0.09% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.06% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatI:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.03% organelle/mitochondria
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.01% Class_I/pararetrovirus:PARA-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/nonchromo-outgroup:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.00% Class_II/Subclass_2/Helitron:Helitron-HEL1
13 13 0.510 0.510 31135 1.44e-23 seqclust/clustering/clusters/dir_CL0013/CL13_tmb.png N/A 4.18e-04 0.834 31133 1490000 18.21% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
18.16% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
13.76% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
3.21% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.16% organelle/mitochondria
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-PROT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
14 14 0.510 0.510 30710 5.13e-16 seqclust/clustering/clusters/dir_CL0014/CL14_tmb.png N/A 1.18e-01 0.650 30710 1410000 0.01% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-INT
0.00% 45S_rDNA/18S_rDNA
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
15 15 0.500 0.500 30258 8.36e-21 seqclust/clustering/clusters/dir_CL0015/CL15_tmb.png N/A 1.89e-02 0.736 30258 1340000 0.44% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
0.00% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
16 16 0.490 0.490 29973 1.17e-22 seqclust/clustering/clusters/dir_CL0016/CL16_tmb.png N/A 1.10e-03 0.718 29973 814000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
18 18 0.490 0.490 29722 3.21e-23 seqclust/clustering/clusters/dir_CL0018/CL18_tmb.png N/A 4.51e-03 0.788 29722 1180000 13.84% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
6.85% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
19 19 0.480 0.480 29268 1.03e-20 seqclust/clustering/clusters/dir_CL0019/CL19_tmb.png N/A 3.26e-02 0.779 29268 339000 5.43% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
2.70% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.00% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
20 20 0.470 0.470 28630 6.48e-19 seqclust/clustering/clusters/dir_CL0020/CL20_tmb.png N/A 5.05e-02 0.621 28630 1390000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
21 21 0.470 0.470 28470 5.53e-20 seqclust/clustering/clusters/dir_CL0021/CL21_tmb.png N/A 3.62e-02 0.727 28470 1250000 35.17% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
10.55% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
3.29% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
2.42% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.88% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.28% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.19% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.14% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.09% organelle/mitochondria
0.08% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.08% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
22 22 0.460 0.460 28067 6.20e-17 seqclust/clustering/clusters/dir_CL0022/CL22_tmb.png N/A 9.96e-02 0.684 28065 1670000
23 23 0.460 0.460 28007 1.17e-22 seqclust/clustering/clusters/dir_CL0023/CL23_tmb.png N/A 2.86e-04 0.721 28007 771000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
24 24 0.460 0.460 27787 3.69e-22 seqclust/clustering/clusters/dir_CL0024/CL24_tmb.png N/A 7.56e-04 0.647 27787 666000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
25 25 0.450 0.450 27385 4.71e-23 seqclust/clustering/clusters/dir_CL0025/CL25_tmb.png N/A 6.21e-04 0.771 27385 1110000 19.66% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
7.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
2.72% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
2.11% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
1.87% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.70% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.54% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.49% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.38% organelle/mitochondria
0.38% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.37% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.37% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.29% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.26% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.11% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.09% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.09% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.08% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.07% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.07% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/Osser:Ty1-GAG
0.05% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.02% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.00% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.00% Class_I/LTR/Ty1_copia/Osser:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
26 26 0.450 0.450 27257 4.98e-11 seqclust/clustering/clusters/dir_CL0026/CL26_tmb.png N/A 2.67e-01 0.744 27257 2950000 28.05% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
23.91% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
19.13% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.72% organelle/mitochondria
0.34% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.17% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
0.01% Class_I/pararetrovirus:PARA-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
27 27 0.450 0.450 27140 1.30e-20 seqclust/clustering/clusters/dir_CL0027/CL27_tmb.png N/A 3.59e-02 0.828 27140 2900000 26.58% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
15.59% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
12.06% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
0.40% organelle/mitochondria
0.34% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
0.26% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.16% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
0.07% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy:Ty3-RT
28 28 0.440 0.440 26954 2.16e-23 seqclust/clustering/clusters/dir_CL0028/CL28_tmb.png N/A 3.71e-04 0.814 26954 1300000 29.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
18.98% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
15.59% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.08% organelle/mitochondria
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
29 29 0.440 0.440 26627 3.99e-11 seqclust/clustering/clusters/dir_CL0029/CL29_tmb.png N/A 2.69e-01 0.768 26627 766000 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% organelle/plastid
30 30 0.430 0.430 26214 3.84e-14 seqclust/clustering/clusters/dir_CL0030/CL30_tmb.png N/A 1.60e-01 0.577 26214 2780000 0.03% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
0.00% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
31 31 0.430 0.430 25901 3.34e-17 seqclust/clustering/clusters/dir_CL0031/CL31_tmb.png N/A 6.69e-02 0.451 25897 12000000 0.02% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.00% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.00% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
32 32 0.420 0.420 25299 2.64e-23 seqclust/clustering/clusters/dir_CL0032/CL32_tmb.png N/A 1.70e-03 0.797 25299 4590000 26.80% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
13.44% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
8.85% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
5.35% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
3.09% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
1.79% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
1.42% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
1.16% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
1.04% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.44% organelle/mitochondria
0.43% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.37% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.21% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.09% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.06% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
34 34 0.410 0.410 24881 1.95e-22 seqclust/clustering/clusters/dir_CL0034/CL34_tmb.png N/A 1.00e-03 0.689 24881 2640000 27.70% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
14.66% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
35 35 0.410 0.410 24858 2.62e-19 seqclust/clustering/clusters/dir_CL0035/CL35_tmb.png N/A 4.34e-02 0.597 24858 16900000
36 36 0.400 0.400 24512 3.90e-23 seqclust/clustering/clusters/dir_CL0036/CL36_tmb.png N/A 5.30e-04 0.782 24512 1750000 30.34% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
16.89% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
15.38% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
4.60% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
1.42% organelle/mitochondria
0.59% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.13% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
37 37 0.400 0.400 24073 1.54e-02 seqclust/clustering/clusters/dir_CL0037/CL37_tmb.png N/A 6.96e-01 0.599 24071 11600000 53.10% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
39 39 0.390 0.390 23472 3.21e-23 seqclust/clustering/clusters/dir_CL0039/CL39_tmb.png N/A 1.41e-03 0.788 23472 3240000 13.32% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
6.25% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
3.90% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
3.18% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
2.79% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
1.12% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
1.03% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.98% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.91% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.37% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.36% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.23% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.10% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.07% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.05% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.02% organelle/mitochondria
40 40 0.390 0.390 23405 1.66e-21 seqclust/clustering/clusters/dir_CL0040/CL40_tmb.png N/A 1.71e-04 0.543 23405 230000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
41 41 0.380 0.380 22975 1.08e-17 seqclust/clustering/clusters/dir_CL0041/CL41_tmb.png N/A 6.99e-02 0.599 22975 7880000
42 42 0.380 0.380 22938 8.21e-23 seqclust/clustering/clusters/dir_CL0042/CL42_tmb.png N/A 2.05e-03 0.736 22938 216000 9.68% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
5.93% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
5.78% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
4.41% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
3.63% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
2.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
0.35% organelle/mitochondria
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
43 43 0.370 0.370 22741 1.03e-04 seqclust/clustering/clusters/dir_CL0043/CL43_tmb.png N/A 5.32e-01 0.637 22741 1060000 2.41% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.01% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
44 44 0.370 0.370 22499 4.11e-21 seqclust/clustering/clusters/dir_CL0044/CL44_tmb.png N/A 5.07e-03 0.588 22499 355000 0.10% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.00% organelle/plastid
45 45 0.370 0.370 22172 1.50e-10 seqclust/clustering/clusters/dir_CL0045/CL45_tmb.png N/A 2.67e-01 0.622 22172 262000 0.01% organelle/plastid
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
46 46 0.360 0.360 21994 6.61e-22 seqclust/clustering/clusters/dir_CL0046/CL46_tmb.png N/A 6.46e-03 0.757 21994 226000 0.00% organelle/plastid
47 47 0.350 0.350 21363 4.98e-22 seqclust/clustering/clusters/dir_CL0047/CL47_tmb.png N/A 1.87e-04 0.632 21363 214000 19.30% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
13.26% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
11.04% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG
4.51% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
0.59% organelle/mitochondria
0.33% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.14% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.09% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-outgroup:Ty3-RT
0.00% Class_I/pararetrovirus:PARA-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/nonchromo-outgroup:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy:Ty3-RT
48 48 0.350 0.350 21302 5.05e-05 seqclust/clustering/clusters/dir_CL0048/CL48_tmb.png N/A 4.95e-01 0.544 21269 6930000 0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
49 49 0.350 0.350 21120 9.81e-23 seqclust/clustering/clusters/dir_CL0049/CL49_tmb.png N/A 6.16e-04 0.731 21120 1070000 11.57% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
6.81% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.00% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
0.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.00% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
50 50 0.340 0.340 20410 9.81e-23 seqclust/clustering/clusters/dir_CL0050/CL50_tmb.png N/A 1.76e-03 0.732 20408 1100000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% 45S_rDNA/25S_rDNA
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
51 51 0.330 0.330 20162 1.14e-21 seqclust/clustering/clusters/dir_CL0051/CL51_tmb.png N/A 8.43e-04 0.567 20162 376000 8.66% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
4.75% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.85% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.73% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.72% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.54% organelle/mitochondria
0.51% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.51% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.25% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.25% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.19% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.16% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.15% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.10% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.08% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.07% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.06% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.00% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.00% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
52 52 0.330 0.330 20052 1.40e-21 seqclust/clustering/clusters/dir_CL0052/CL52_tmb.png N/A 1.04e-02 0.699 20052 3730000 12.65% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
53 53 0.330 0.330 20029 6.64e-17 seqclust/clustering/clusters/dir_CL0053/CL53_tmb.png N/A 8.45e-02 0.564 20029 11400000
54 54 0.330 0.330 19996 2.44e-21 seqclust/clustering/clusters/dir_CL0054/CL54_tmb.png N/A 2.14e-02 0.824 19996 2560000 23.90% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
7.48% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
6.45% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
6.36% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-PROT
1.66% organelle/mitochondria
0.30% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
55 55 0.320 0.320 19433 6.46e-16 seqclust/clustering/clusters/dir_CL0055/CL55_tmb.png N/A 9.49e-02 0.455 19433 9650000
57 57 0.320 0.320 19282 3.28e-22 seqclust/clustering/clusters/dir_CL0057/CL57_tmb.png N/A 1.05e-02 0.813 19282 1780000
58 58 0.320 0.320 19226 9.62e-21 seqclust/clustering/clusters/dir_CL0058/CL58_tmb.png N/A 4.45e-02 0.846 19226 1890000 14.94% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
59 59 0.320 0.320 19221 3.80e-22 seqclust/clustering/clusters/dir_CL0059/CL59_tmb.png N/A 1.18e-02 0.802 19221 465000 0.03% organelle/mitochondria
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
60 60 0.310 0.310 19087 3.80e-22 seqclust/clustering/clusters/dir_CL0060/CL60_tmb.png N/A 1.02e-02 0.805 19087 369000 13.21% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
12.29% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.96% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
61 61 0.310 0.310 18737 1.39e-22 seqclust/clustering/clusters/dir_CL0061/CL61_tmb.png N/A 1.60e-04 0.711 18737 83600 16.59% Class_I/LINE:LINE-RT
7.61% Class_I/LINE:LINE-ENDO
0.15% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
62 62 0.300 0.300 18023 5.53e-21 seqclust/clustering/clusters/dir_CL0062/CL62_tmb.png N/A 9.60e-03 0.552 18023 11900000 69.00% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
1.92% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.16% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
63 63 0.300 0.300 17898 7.09e-21 seqclust/clustering/clusters/dir_CL0063/CL63_tmb.png N/A 1.05e-02 0.509 17898 175000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LINE:LINE-RT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.01% organelle/plastid
65 65 0.290 0.290 17527 7.55e-22 seqclust/clustering/clusters/dir_CL0065/CL65_tmb.png N/A 1.19e-02 0.751 17527 2280000 13.73% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
2.21% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
66 66 0.280 0.280 17216 6.70e-21 seqclust/clustering/clusters/dir_CL0066/CL66_tmb.png N/A 5.92e-03 0.518 17216 2620000 23.33% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
16.44% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
67 67 0.280 0.280 16955 7.64e-22 seqclust/clustering/clusters/dir_CL0067/CL67_tmb.png N/A 2.60e-03 0.605 16955 3530000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.01% Class_I/pararetrovirus:PARA-RT
68 68 0.280 0.280 16927 2.01e-04 seqclust/clustering/clusters/dir_CL0068/CL68_tmb.png N/A 5.58e-01 0.716 16913 289000 2.33% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.19% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.14% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.10% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
69 69 0.280 0.280 16841 3.90e-23 seqclust/clustering/clusters/dir_CL0069/CL69_tmb.png N/A 1.43e-03 0.784 16841 2180000 26.77% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
23.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
3.86% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.33% organelle/mitochondria
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
70 70 0.280 0.280 16797 1.76e-23 seqclust/clustering/clusters/dir_CL0070/CL70_tmb.png N/A 1.79e-04 0.820 16797 129000 13.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
9.38% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
7.20% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
4.24% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
3.73% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
1.51% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
1.35% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.74% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.26% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.10% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.07% organelle/mitochondria
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
0.01% Class_I/pararetrovirus:PARA-RT
71 71 0.270 0.270 16570 4.45e-21 seqclust/clustering/clusters/dir_CL0071/CL71_tmb.png N/A 5.31e-03 0.582 16570 10200000 35.50% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.31% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.07% organelle/mitochondria
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
72 72 0.270 0.270 16530 8.58e-22 seqclust/clustering/clusters/dir_CL0072/CL72_tmb.png N/A 1.26e-02 0.741 16528 3570000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
73 73 0.270 0.270 16445 2.83e-22 seqclust/clustering/clusters/dir_CL0073/CL73_tmb.png N/A 1.31e-02 0.819 16445 2910000 38.86% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
19.81% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
1.31% organelle/mitochondria
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
74 74 0.270 0.270 16390 1.39e-22 seqclust/clustering/clusters/dir_CL0074/CL74_tmb.png N/A 3.23e-03 0.707 16390 575000 0.01% 45S_rDNA/25S_rDNA
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
75 75 0.270 0.270 16384 1.48e-06 seqclust/clustering/clusters/dir_CL0075/CL75_tmb.png N/A 4.22e-01 0.476 16384 11700000 39.86% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
5.55% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
76 76 0.270 0.270 16368 9.81e-23 seqclust/clustering/clusters/dir_CL0076/CL76_tmb.png N/A 3.91e-03 0.725 16368 4050000 16.01% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
10.89% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.42% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.27% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.11% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.01% 45S_rDNA/25S_rDNA
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-PROT
77 77 0.270 0.270 16115 8.21e-23 seqclust/clustering/clusters/dir_CL0077/CL77_tmb.png N/A 6.83e-04 0.737 16113 1760000 17.07% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
78 78 0.270 0.270 16085 1.86e-21 seqclust/clustering/clusters/dir_CL0078/CL78_tmb.png N/A 3.11e-03 0.534 16085 1420000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RH
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
79 79 0.260 0.260 15760 1.53e-13 seqclust/clustering/clusters/dir_CL0079/CL79_tmb.png N/A 1.68e-01 0.542 15760 1570000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
80 80 0.260 0.260 15729 1.39e-22 seqclust/clustering/clusters/dir_CL0080/CL80_tmb.png N/A 1.91e-04 0.715 15729 84400 0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
81 81 0.260 0.260 15595 5.16e-21 seqclust/clustering/clusters/dir_CL0081/CL81_tmb.png N/A 8.98e-03 0.563 15595 78200 9.43% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
6.55% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
1.72% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
1.39% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.65% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.39% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.32% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.30% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.26% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.16% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.07% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.06% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.06% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.04% organelle/mitochondria
0.04% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
82 82 0.260 0.260 15485 4.29e-16 seqclust/clustering/clusters/dir_CL0082/CL82_tmb.png N/A 1.37e-01 0.781 15475 290000 18.43% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% organelle/plastid
83 83 0.250 0.250 15423 8.21e-23 seqclust/clustering/clusters/dir_CL0083/CL83_tmb.png N/A 1.62e-03 0.740 15423 1500000 31.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
0.01% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
84 84 0.250 0.250 15380 2.21e-20 seqclust/clustering/clusters/dir_CL0084/CL84_tmb.png N/A 2.10e-02 0.672 15380 374000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
85 85 0.250 0.250 15295 7.16e-19 seqclust/clustering/clusters/dir_CL0085/CL85_tmb.png N/A 5.51e-02 0.711 15295 4140000 7.48% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
3.18% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
2.06% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.19% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.12% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.11% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Osser:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
86 86 0.250 0.250 15294 5.17e-19 seqclust/clustering/clusters/dir_CL0086/CL86_tmb.png N/A 3.60e-02 0.523 15294 856000 12.72% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
87 87 0.250 0.250 15073 5.04e-07 seqclust/clustering/clusters/dir_CL0087/CL87_tmb.png N/A 4.20e-01 0.711 15073 238000 12.10% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
10.99% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
5.11% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
3.97% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
3.64% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
2.58% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.38% organelle/mitochondria
0.09% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
88 88 0.240 0.240 14848 6.30e-21 seqclust/clustering/clusters/dir_CL0088/CL88_tmb.png N/A 8.01e-03 0.535 14848 9360000 83.29% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
0.01% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
89 89 0.240 0.240 14805 2.80e-20 seqclust/clustering/clusters/dir_CL0089/CL89_tmb.png N/A 2.86e-02 0.705 14805 206000 7.00% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
3.84% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
2.88% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
1.18% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.18% organelle/mitochondria
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
90 90 0.240 0.240 14734 2.09e-21 seqclust/clustering/clusters/dir_CL0090/CL90_tmb.png N/A 8.14e-04 0.517 14734 172000 0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
91 91 0.240 0.240 14693 1.17e-23 seqclust/clustering/clusters/dir_CL0091/CL91_tmb.png N/A 5.44e-04 0.837 14693 692000 22.43% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
12.68% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
8.79% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
8.48% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
5.63% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
2.42% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
1.17% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
92 92 0.240 0.240 14665 5.89e-03 seqclust/clustering/clusters/dir_CL0092/CL92_tmb.png N/A 6.67e-01 0.850 14665 147000 8.97% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
6.26% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
6.24% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
3.19% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
2.12% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
93 93 0.240 0.240 14476 2.16e-23 seqclust/clustering/clusters/dir_CL0093/CL93_tmb.png N/A 2.07e-04 0.812 14476 201000 17.71% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
11.97% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
8.55% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
7.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
4.41% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
95 95 0.230 0.230 14133 4.71e-23 seqclust/clustering/clusters/dir_CL0095/CL95_tmb.png N/A 1.56e-03 0.768 14133 2060000 37.73% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
14.80% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
5.16% organelle/mitochondria
0.77% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.33% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.17% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.06% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.06% Class_I/LTR/Ty1_copia/Osser:Ty1-RH
0.06% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Osser:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Bianca:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
96 96 0.230 0.230 14063 6.61e-22 seqclust/clustering/clusters/dir_CL0096/CL96_tmb.png N/A 1.25e-02 0.758 14063 523000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% organelle/plastid
97 97 0.230 0.230 13990 2.64e-21 seqclust/clustering/clusters/dir_CL0097/CL97_tmb.png N/A 1.29e-02 0.643 13990 3040000 5.63% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.02% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
98 98 0.230 0.230 13873 2.14e-09 seqclust/clustering/clusters/dir_CL0098/CL98_tmb.png N/A 3.26e-01 0.779 13873 2770000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
99 99 0.230 0.230 13870 1.58e-15 seqclust/clustering/clusters/dir_CL0099/CL99_tmb.png N/A 1.60e-01 0.827 13870 707000 1.64% Class_II/Subclass_1/TIR/Sola1:Sola1-TPase
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
100 100 0.230 0.230 13847 4.71e-23 seqclust/clustering/clusters/dir_CL0100/CL100_tmb.png N/A 7.22e-05 0.767 13847 107000 14.46% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
13.61% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
9.77% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
7.98% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
5.96% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
3.32% organelle/mitochondria
0.77% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.01% organelle/plastid
101 101 0.230 0.230 13740 3.69e-22 seqclust/clustering/clusters/dir_CL0101/CL101_tmb.png N/A 2.18e-03 0.646 13740 1900000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
102 102 0.230 0.230 13733 2.61e-21 seqclust/clustering/clusters/dir_CL0102/CL102_tmb.png N/A 4.59e-03 0.501 13731 2460000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
103 103 0.230 0.230 13693 5.16e-21 seqclust/clustering/clusters/dir_CL0103/CL103_tmb.png N/A 8.18e-03 0.557 13693 8580000 78.32% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.12% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
0.11% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-outgroup:Ty3-INT
104 104 0.220 0.220 13619 3.82e-16 seqclust/clustering/clusters/dir_CL0104/CL104_tmb.png N/A 1.40e-01 0.789 13607 1890000 27.63% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
11.17% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
8.60% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.59% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.29% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.07% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.06% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.04% organelle/mitochondria
0.04% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Osser:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
105 105 0.220 0.220 13596 1.82e-08 seqclust/clustering/clusters/dir_CL0105/CL105_tmb.png N/A 3.51e-01 0.655 13596 468000 0.19% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
106 106 0.220 0.220 13562 1.95e-21 seqclust/clustering/clusters/dir_CL0106/CL106_tmb.png N/A 7.30e-03 0.665 13562 152000
107 107 0.220 0.220 13454 2.83e-22 seqclust/clustering/clusters/dir_CL0107/CL107_tmb.png N/A 5.57e-03 0.816 13454 2850000 1.71% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
1.03% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.59% Class_I/LTR/Ty1_copia/Alesia:Ty1-GAG
0.38% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.16% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-PROT
0.13% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.05% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Bryco:Ty1-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
108 108 0.220 0.220 13392 3.21e-23 seqclust/clustering/clusters/dir_CL0108/CL108_tmb.png N/A 9.71e-04 0.790 13392 714000 20.18% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
109 109 0.220 0.220 13259 2.83e-22 seqclust/clustering/clusters/dir_CL0109/CL109_tmb.png N/A 1.12e-02 0.815 13259 224000 5.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
4.67% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.01% Class_II/Subclass_1/TIR/hAT:hAT-TPase
110 110 0.220 0.220 13245 5.78e-22 seqclust/clustering/clusters/dir_CL0110/CL110_tmb.png N/A 1.26e-02 0.773 13245 350000 11.19% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
111 111 0.220 0.220 13177 3.93e-13 seqclust/clustering/clusters/dir_CL0111/CL111_tmb.png N/A 1.68e-01 0.451 13177 1930000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
112 112 0.210 0.210 12956 1.76e-23 seqclust/clustering/clusters/dir_CL0112/CL112_tmb.png N/A 1.08e-03 0.819 12956 303000
113 113 0.210 0.210 12791 2.70e-22 seqclust/clustering/clusters/dir_CL0113/CL113_tmb.png N/A 3.05e-03 0.672 12791 4100000 13.10% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
8.45% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
4.95% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
3.87% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
2.57% organelle/mitochondria
2.09% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
1.34% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.63% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.62% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.57% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.10% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Bianca:Ty1-RT
114 114 0.210 0.210 12641 5.62e-21 seqclust/clustering/clusters/dir_CL0114/CL114_tmb.png N/A 2.78e-02 0.822 12641 608000 0.02% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
115 115 0.210 0.210 12609 1.14e-21 seqclust/clustering/clusters/dir_CL0115/CL115_tmb.png N/A 3.17e-04 0.573 12609 138000
116 116 0.210 0.210 12592 1.09e-19 seqclust/clustering/clusters/dir_CL0116/CL116_tmb.png N/A 1.75e-02 0.517 12592 9560000 62.47% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
5.92% organelle/mitochondria
0.16% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.06% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
117 117 0.200 0.200 12360 1.56e-21 seqclust/clustering/clusters/dir_CL0117/CL117_tmb.png N/A 9.06e-03 0.687 12360 378000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
118 118 0.200 0.200 12257 1.19e-20 seqclust/clustering/clusters/dir_CL0118/CL118_tmb.png N/A 3.44e-02 0.774 12208 112000 0.20% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.02% organelle/plastid
120 120 0.190 0.190 11785 2.03e-12 seqclust/clustering/clusters/dir_CL0120/CL120_tmb.png N/A 2.18e-01 0.648 11783 120000 0.04% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-GAG
0.03% organelle/mitochondria
0.03% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
121 121 0.190 0.190 11784 1.17e-23 seqclust/clustering/clusters/dir_CL0121/CL121_tmb.png N/A 2.55e-04 0.844 11784 131000 12.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
8.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
7.73% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
2.90% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
1.81% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.14% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.07% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
122 122 0.190 0.190 11584 1.48e-17 seqclust/clustering/clusters/dir_CL0122/CL122_tmb.png N/A 7.70e-02 0.660 11244 442000 1.84% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.01% organelle/plastid
124 124 0.190 0.190 11482 8.21e-23 seqclust/clustering/clusters/dir_CL0124/CL124_tmb.png N/A 3.48e-04 0.737 11482 252000 49.52% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
9.50% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
5.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
1.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.37% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.26% organelle/mitochondria
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatI:Ty3-INT
125 125 0.190 0.190 11418 4.71e-23 seqclust/clustering/clusters/dir_CL0125/CL125_tmb.png N/A 3.77e-03 0.773 11418 1590000 15.90% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
126 126 0.190 0.190 11351 2.21e-20 seqclust/clustering/clusters/dir_CL0126/CL126_tmb.png N/A 1.92e-02 0.673 11351 1390000 31.90% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
20.48% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
2.05% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.55% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
0.50% organelle/mitochondria
0.07% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
127 127 0.190 0.190 11337 3.16e-22 seqclust/clustering/clusters/dir_CL0127/CL127_tmb.png N/A 3.70e-03 0.659 11337 3700000 38.18% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
2.13% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
2.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
1.86% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
1.83% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
1.43% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
1.37% organelle/mitochondria
0.71% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.58% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.19% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.01% Class_I/LINE:LINE-ENDO
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RH
0.01% Class_I/LINE:LINE-RT
0.01% Class_I/LTR/Ty1_copia/Osser:Ty1-RT
128 128 0.190 0.190 11331 3.90e-23 seqclust/clustering/clusters/dir_CL0128/CL128_tmb.png N/A 1.41e-03 0.784 11331 708000 3.22% Class_I/LINE:LINE-RT
129 129 0.180 0.180 11164 6.55e-21 seqclust/clustering/clusters/dir_CL0129/CL129_tmb.png N/A 3.17e-02 0.812 11164 562000 16.70% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
130 130 0.180 0.180 11157 5.88e-16 seqclust/clustering/clusters/dir_CL0130/CL130_tmb.png N/A 8.79e-02 0.473 11155 3310000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
131 131 0.180 0.180 11119 2.49e-24 seqclust/clustering/clusters/dir_CL0131/CL131_tmb.png N/A 9.06e-05 0.911 11036 226000 99.53% organelle/plastid
0.13% organelle/mitochondria
0.05% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
132 132 0.180 0.180 11007 4.71e-23 seqclust/clustering/clusters/dir_CL0132/CL132_tmb.png N/A 2.36e-03 0.766 11007 2780000 24.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
19.55% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
7.27% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
3.68% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
2.96% organelle/mitochondria
2.66% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
2.53% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
1.21% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.98% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.97% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.88% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.79% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.36% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.23% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.13% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.06% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/TAR:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Osser:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Osser:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
133 133 0.180 0.180 10884 1.18e-20 seqclust/clustering/clusters/dir_CL0133/CL133_tmb.png N/A 1.23e-02 0.338 10884 6720000 71.50% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.39% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-CHDII
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
134 134 0.180 0.180 10883 7.48e-09 seqclust/clustering/clusters/dir_CL0134/CL134_tmb.png N/A 3.35e-01 0.633 10883 1130000 2.74% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.04% Class_I/pararetrovirus:PARA-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.01% Class_I/LINE:LINE-RT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
135 135 0.180 0.180 10857 1.65e-22 seqclust/clustering/clusters/dir_CL0135/CL135_tmb.png N/A 1.66e-03 0.704 10857 712000
136 136 0.180 0.180 10769 2.16e-23 seqclust/clustering/clusters/dir_CL0136/CL136_tmb.png N/A 1.58e-03 0.808 10769 188000
137 137 0.180 0.180 10730 2.47e-15 seqclust/clustering/clusters/dir_CL0137/CL137_tmb.png N/A 1.54e-01 0.708 10730 710000 10.85% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.85% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.15% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.07% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.06% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.01% organelle/mitochondria
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Osser:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
138 138 0.180 0.180 10648 6.21e-21 seqclust/clustering/clusters/dir_CL0138/CL138_tmb.png N/A 2.31e-02 0.763 10648 278000 0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LINE:LINE-ENDO
139 139 0.170 0.170 10576 3.16e-22 seqclust/clustering/clusters/dir_CL0139/CL139_tmb.png N/A 4.73e-04 0.662 10576 101000 12.15% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
6.22% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
140 140 0.170 0.170 10366 1.81e-13 seqclust/clustering/clusters/dir_CL0140/CL140_tmb.png N/A 1.63e-01 0.464 10366 2940000 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
141 141 0.170 0.170 10360 8.45e-20 seqclust/clustering/clusters/dir_CL0141/CL141_tmb.png N/A 3.36e-02 0.620 10360 2820000 38.22% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
11.36% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
8.14% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
5.82% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
1.86% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
1.37% organelle/mitochondria
1.14% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.38% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.17% Class_I/LTR/Ty1_copia/Osser:Ty1-INT
0.13% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.10% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
142 142 0.170 0.170 10225 9.81e-23 seqclust/clustering/clusters/dir_CL0142/CL142_tmb.png N/A 9.78e-05 0.728 10225 71900
143 143 0.170 0.170 10108 4.98e-22 seqclust/clustering/clusters/dir_CL0143/CL143_tmb.png N/A 2.97e-04 0.626 10108 74200
144 144 0.170 0.170 10060 1.76e-23 seqclust/clustering/clusters/dir_CL0144/CL144_tmb.png N/A 6.96e-04 0.821 10060 224000 17.15% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
12.68% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
9.07% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
4.88% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
4.73% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
1.02% organelle/mitochondria
0.37% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.33% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.09% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
145 145 0.160 0.160 9898 1.29e-21 seqclust/clustering/clusters/dir_CL0145/CL145_tmb.png N/A 3.03e-04 0.564 9898 92100 56.79% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
11.60% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
2.58% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
1.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.28% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
0.13% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
0.10% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-INT
0.01% organelle/plastid
146 146 0.160 0.160 9810 8.21e-23 seqclust/clustering/clusters/dir_CL0146/CL146_tmb.png N/A 2.04e-03 0.745 9810 601000 0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.03% organelle/plastid
0.02% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
147 147 0.160 0.160 9785 2.48e-07 seqclust/clustering/clusters/dir_CL0147/CL147_tmb.png N/A 4.10e-01 0.311 9785 6920000
148 148 0.160 0.160 9744 1.60e-18 seqclust/clustering/clusters/dir_CL0148/CL148_tmb.png N/A 6.11e-02 0.653 9738 221000
149 149 0.160 0.160 9568 5.69e-23 seqclust/clustering/clusters/dir_CL0149/CL149_tmb.png N/A 1.05e-04 0.757 9568 60800 13.36% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
9.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
7.23% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
3.25% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
3.24% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
2.60% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-PROT
2.48% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
2.28% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
2.07% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.74% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.68% organelle/mitochondria
0.64% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.53% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.43% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.34% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.34% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.33% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.32% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.19% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.18% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.18% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.17% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.17% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.09% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.07% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.06% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.06% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Bryco:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
150 150 0.160 0.160 9555 1.26e-13 seqclust/clustering/clusters/dir_CL0150/CL150_tmb.png N/A 1.85e-01 0.666 9555 123000 0.03% organelle/plastid
0.02% organelle/mitochondria
151 151 0.160 0.160 9452 1.56e-21 seqclust/clustering/clusters/dir_CL0151/CL151_tmb.png N/A 1.02e-02 0.690 9452 113000 11.27% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
5.42% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
3.41% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
2.61% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.88% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.78% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.71% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.66% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.66% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.65% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.60% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.52% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.31% organelle/mitochondria
0.30% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.20% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.12% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.12% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.11% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.01% organelle/plastid
0.01% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
152 152 0.160 0.160 9403 7.34e-18 seqclust/clustering/clusters/dir_CL0152/CL152_tmb.png N/A 5.64e-02 0.467 9401 47400 29.21% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
2.59% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
1.68% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
1.54% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.27% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatI:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/Selgy:Ty3-INT
153 153 0.150 0.150 9398 4.80e-21 seqclust/clustering/clusters/dir_CL0153/CL153_tmb.png N/A 8.09e-03 0.574 9398 1480000 0.72% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
154 154 0.150 0.150 9329 3.21e-23 seqclust/clustering/clusters/dir_CL0154/CL154_tmb.png N/A 6.43e-04 0.794 9329 342000
155 155 0.150 0.150 9298 9.81e-23 seqclust/clustering/clusters/dir_CL0155/CL155_tmb.png N/A 3.23e-03 0.732 9298 2470000 39.51% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
4.24% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
4.23% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
2.04% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.82% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.29% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.25% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.23% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.17% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.17% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.16% organelle/mitochondria
0.06% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.06% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Osser:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
156 156 0.150 0.150 9158 1.65e-22 seqclust/clustering/clusters/dir_CL0156/CL156_tmb.png N/A 5.46e-04 0.696 9158 183000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
157 157 0.150 0.150 9142 7.07e-14 seqclust/clustering/clusters/dir_CL0157/CL157_tmb.png N/A 1.87e-01 0.716 9142 79000 27.98% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
17.30% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
2.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RH
0.75% organelle/mitochondria
0.26% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.01% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RH
158 158 0.150 0.150 9122 8.76e-17 seqclust/clustering/clusters/dir_CL0158/CL158_tmb.png N/A 9.55e-02 0.660 9122 50200
159 159 0.150 0.150 9040 8.23e-19 seqclust/clustering/clusters/dir_CL0159/CL159_tmb.png N/A 5.61e-02 0.704 9040 130000 0.03% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
160 160 0.150 0.150 9018 3.11e-18 seqclust/clustering/clusters/dir_CL0160/CL160_tmb.png N/A 6.55e-02 0.689 9018 173000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.01% organelle/plastid
161 161 0.150 0.150 8945 5.53e-21 seqclust/clustering/clusters/dir_CL0161/CL161_tmb.png N/A 6.60e-03 0.553 8945 50400 2.77% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.77% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.75% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.54% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.38% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.18% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.09% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.06% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.04% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Bryco:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
0.01% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.01% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
162 162 0.150 0.150 8850 8.15e-13 seqclust/clustering/clusters/dir_CL0162/CL162_tmb.png N/A 2.04e-01 0.587 8331 157000 0.01% Class_II/Subclass_2/Helitron:Helitron-HEL2
0.01% organelle/plastid
163 163 0.150 0.150 8821 1.53e-19 seqclust/clustering/clusters/dir_CL0163/CL163_tmb.png N/A 3.15e-02 0.557 8821 1340000 0.01% Class_I/LINE:LINE-RT
165 165 0.140 0.140 8311 7.64e-20 seqclust/clustering/clusters/dir_CL0165/CL165_tmb.png N/A 1.71e-02 0.564 8311 55500 6.04% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.67% Class_I/LTR/Ty1_copia/Tork:Ty1-GAG
0.24% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.14% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.04% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.01% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
166 166 0.140 0.140 8298 1.17e-22 seqclust/clustering/clusters/dir_CL0166/CL166_tmb.png N/A 3.62e-04 0.724 8298 40500 18.59% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
11.53% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
9.70% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
6.85% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG
5.10% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
3.54% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
1.19% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
167 167 0.140 0.140 8273 2.09e-21 seqclust/clustering/clusters/dir_CL0167/CL167_tmb.png N/A 3.63e-04 0.519 8273 44900 0.01% organelle/plastid
168 168 0.130 0.130 8062 1.29e-21 seqclust/clustering/clusters/dir_CL0168/CL168_tmb.png N/A 4.09e-03 0.563 8062 2240000 50.50% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
2.37% Class_I/LTR/Ty1_copia/Bryco:Ty1-RH
1.64% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
1.14% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RH
0.81% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.40% Class_I/LTR/Ty1_copia/Angela:Ty1-RH
0.11% Class_I/LTR/Ty1_copia/TAR:Ty1-RH
0.11% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.10% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Osser:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
169 169 0.130 0.130 8024 1.65e-22 seqclust/clustering/clusters/dir_CL0169/CL169_tmb.png N/A 1.62e-03 0.697 8024 319000 0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
170 170 0.130 0.130 7853 2.07e-12 seqclust/clustering/clusters/dir_CL0170/CL170_tmb.png N/A 2.07e-01 0.578 7843 71600 0.17% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.08% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.01% organelle/plastid
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.01% Class_I/pararetrovirus:PARA-RT
171 171 0.130 0.130 7825 3.69e-22 seqclust/clustering/clusters/dir_CL0171/CL171_tmb.png N/A 3.83e-04 0.650 7825 44600
172 172 0.130 0.130 7717 1.66e-21 seqclust/clustering/clusters/dir_CL0172/CL172_tmb.png N/A 3.89e-04 0.543 7717 53100 17.83% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
9.07% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
8.33% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
3.80% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
1.84% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
1.27% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
1.24% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.45% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
0.32% organelle/mitochondria
0.17% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.12% Class_I/LTR/Ty3_gypsy/chromovirus/Tcn1:Ty3-RT
0.08% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.08% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-outgroup:Ty3-RT
174 174 0.120 0.120 7447 1.29e-21 seqclust/clustering/clusters/dir_CL0174/CL174_tmb.png N/A 5.37e-04 0.562 7447 69000 0.03% organelle/plastid
175 175 0.120 0.120 7381 9.81e-23 seqclust/clustering/clusters/dir_CL0175/CL175_tmb.png N/A 2.85e-03 0.731 7381 296000 0.03% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
176 176 0.120 0.120 7225 5.78e-22 seqclust/clustering/clusters/dir_CL0176/CL176_tmb.png N/A 7.34e-03 0.766 7225 67200 3.72% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
2.48% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
2.12% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
0.06% organelle/mitochondria
0.01% organelle/plastid
177 177 0.120 0.120 7139 1.41e-12 seqclust/clustering/clusters/dir_CL0177/CL177_tmb.png N/A 2.32e-01 0.784 7139 131000 3.19% Class_I/LINE:LINE-RT
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.01% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
178 178 0.120 0.120 7137 3.03e-19 seqclust/clustering/clusters/dir_CL0178/CL178_tmb.png N/A 6.07e-02 0.772 7137 64700 10.86% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
5.51% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
4.15% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
2.51% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
2.21% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-GAG
1.72% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
0.53% organelle/mitochondria
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
179 179 0.120 0.120 7108 1.10e-21 seqclust/clustering/clusters/dir_CL0179/CL179_tmb.png N/A 6.89e-03 0.716 7108 652000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
180 180 0.120 0.120 7043 2.64e-23 seqclust/clustering/clusters/dir_CL0180/CL180_tmb.png N/A 3.41e-03 0.796 7043 154000 3.38% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
1.66% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.81% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
181 181 0.120 0.120 7039 2.20e-15 seqclust/clustering/clusters/dir_CL0181/CL181_tmb.png N/A 1.35e-01 0.655 7039 312000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
182 182 0.110 0.110 6908 3.22e-20 seqclust/clustering/clusters/dir_CL0182/CL182_tmb.png N/A 2.33e-02 0.635 6908 1290000 0.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
183 183 0.110 0.110 6893 4.29e-22 seqclust/clustering/clusters/dir_CL0183/CL183_tmb.png N/A 4.35e-04 0.640 6893 27900
184 184 0.110 0.110 6843 4.75e-18 seqclust/clustering/clusters/dir_CL0184/CL184_tmb.png N/A 8.94e-02 0.791 6843 90800 3.16% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-GAG
2.29% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-PROT
0.69% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
0.01% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
185 185 0.110 0.110 6806 4.98e-22 seqclust/clustering/clusters/dir_CL0185/CL185_tmb.png N/A 4.41e-04 0.629 6806 60400 0.01% Class_I/Penelope:Penelope-RT
0.01% organelle/plastid
186 186 0.110 0.110 6541 4.29e-21 seqclust/clustering/clusters/dir_CL0186/CL186_tmb.png N/A 4.59e-04 0.447 6541 92700 2.94% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
187 187 0.110 0.110 6532 3.61e-18 seqclust/clustering/clusters/dir_CL0187/CL187_tmb.png N/A 6.55e-02 0.682 6532 164000 0.12% organelle/mitochondria
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
189 189 0.100 0.100 6318 5.91e-21 seqclust/clustering/clusters/dir_CL0189/CL189_tmb.png N/A 6.18e-03 0.539 5341 337000 0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
190 190 0.100 0.100 6297 8.45e-20 seqclust/clustering/clusters/dir_CL0190/CL190_tmb.png N/A 3.16e-02 0.618 6297 623000 0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
191 191 0.100 0.100 6197 1.66e-21 seqclust/clustering/clusters/dir_CL0191/CL191_tmb.png N/A 1.29e-03 0.542 6197 43500 5.49% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
2.76% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
192 192 0.100 0.100 6143 1.56e-24 seqclust/clustering/clusters/dir_CL0192/CL192_tmb.png N/A 1.63e-04 0.931 6143 121000 99.95% organelle/plastid
193 193 0.100 0.100 6080 8.21e-23 seqclust/clustering/clusters/dir_CL0193/CL193_tmb.png N/A 4.28e-03 0.745 6080 60900
194 194 0.099 0.099 6013 6.89e-15 seqclust/clustering/clusters/dir_CL0194/CL194_tmb.png N/A 1.80e-01 0.889 6013 323000 38.12% 45S_rDNA/18S_rDNA
6.62% 45S_rDNA/25S_rDNA
2.68% 45S_rDNA/5.8S_rDNA
0.03% organelle/mitochondria
0.02% 5S_rDNA/5S_rDNA
195 195 0.098 0.098 5968 2.62e-19 seqclust/clustering/clusters/dir_CL0195/CL195_tmb.png N/A 5.70e-02 0.784 5929 79000
196 196 0.097 0.097 5855 3.21e-21 seqclust/clustering/clusters/dir_CL0196/CL196_tmb.png N/A 5.12e-04 0.477 5855 26200 0.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
197 197 0.095 0.095 5786 6.30e-21 seqclust/clustering/clusters/dir_CL0197/CL197_tmb.png N/A 9.85e-03 0.527 5786 76900 0.36% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-PROT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
198 198 0.095 0.095 5757 1.64e-05 seqclust/clustering/clusters/dir_CL0198/CL198_tmb.png N/A 4.97e-01 0.755 5757 48900
199 199 0.093 0.093 5620 1.44e-23 seqclust/clustering/clusters/dir_CL0199/CL199_tmb.png N/A 1.07e-03 0.828 5620 153000 25.82% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
200 200 0.091 0.091 5540 1.66e-21 seqclust/clustering/clusters/dir_CL0200/CL200_tmb.png N/A 5.42e-04 0.540 5540 49000
201 201 0.091 0.091 5522 1.56e-24 seqclust/clustering/clusters/dir_CL0201/CL201_tmb.png N/A 1.09e-03 0.929 5522 110000 99.78% organelle/plastid
202 202 0.090 0.090 5480 3.80e-22 seqclust/clustering/clusters/dir_CL0202/CL202_tmb.png N/A 8.76e-03 0.798 5480 39900 13.70% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
7.94% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
6.46% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
4.62% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
3.65% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
3.45% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.75% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.20% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.09% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.09% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.02% Class_I/pararetrovirus:PARA-RT
203 203 0.088 0.088 5352 3.16e-22 seqclust/clustering/clusters/dir_CL0203/CL203_tmb.png N/A 7.48e-04 0.664 5350 47600
204 204 0.087 0.087 5259 4.38e-22 seqclust/clustering/clusters/dir_CL0204/CL204_tmb.png N/A 1.45e-02 0.791 5259 49200 1.50% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.49% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
206 206 0.086 0.086 5200 1.39e-22 seqclust/clustering/clusters/dir_CL0206/CL206_tmb.png N/A 1.92e-04 0.706 5200 32800 5.81% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
207 207 0.085 0.085 5168 3.14e-18 seqclust/clustering/clusters/dir_CL0207/CL207_tmb.png N/A 9.19e-02 0.820 5134 43400
208 208 0.084 0.084 5101 2.12e-20 seqclust/clustering/clusters/dir_CL0208/CL208_tmb.png N/A 3.23e-02 0.733 5101 35700 6.14% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
3.78% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
2.94% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
2.25% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
2.22% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
0.51% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.16% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.14% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
0.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.02% organelle/mitochondria
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.02% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
209 209 0.084 0.084 5069 2.97e-20 seqclust/clustering/clusters/dir_CL0209/CL209_tmb.png N/A 5.23e-02 0.853 5069 90100 12.33% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
8.38% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
6.73% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RH
4.06% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
3.35% Class_I/LTR/Ty1_copia/Ikeros:Ty1-GAG
0.79% organelle/mitochondria
0.06% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
210 210 0.084 0.084 5068 3.13e-05 seqclust/clustering/clusters/dir_CL0210/CL210_tmb.png N/A 5.23e-01 0.889 5068 905000
211 211 0.083 0.083 5045 2.70e-22 seqclust/clustering/clusters/dir_CL0211/CL211_tmb.png N/A 2.97e-03 0.668 5045 116000 1.11% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
212 212 0.080 0.080 4867 5.69e-23 seqclust/clustering/clusters/dir_CL0212/CL212_tmb.png N/A 8.22e-04 0.763 4867 88300 22.40% Class_II/Subclass_1/TIR/hAT:hAT-TPase
213 213 0.080 0.080 4853 1.03e-18 seqclust/clustering/clusters/dir_CL0213/CL213_tmb.png N/A 3.88e-02 0.389 4843 94600 0.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
214 214 0.080 0.080 4827 4.71e-23 seqclust/clustering/clusters/dir_CL0214/CL214_tmb.png N/A 3.31e-03 0.772 4827 64200 22.19% Class_II/Subclass_1/TIR/hAT:hAT-TPase
0.02% organelle/plastid
215 215 0.078 0.078 4729 4.09e-13 seqclust/clustering/clusters/dir_CL0215/CL215_tmb.png N/A 2.11e-01 0.718 4729 65400 0.72% Class_II/Subclass_1/TIR/Sola1:Sola1-TPase
216 216 0.074 0.074 4471 8.87e-21 seqclust/clustering/clusters/dir_CL0216/CL216_tmb.png N/A 2.57e-02 0.786 4471 43600 0.83% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.02% organelle/mitochondria
0.02% organelle/plastid
217 217 0.072 0.072 4380 4.08e-20 seqclust/clustering/clusters/dir_CL0217/CL217_tmb.png N/A 1.62e-02 0.625 4380 104000 0.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
218 218 0.072 0.072 4374 3.97e-20 seqclust/clustering/clusters/dir_CL0218/CL218_tmb.png N/A 5.24e-02 0.829 4374 94100 10.45% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
219 219 0.070 0.070 4254 5.59e-03 seqclust/clustering/clusters/dir_CL0219/CL219_tmb.png N/A 6.68e-01 0.755 4254 56900 5.27% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
5.10% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
2.35% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
2.16% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
1.46% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.87% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.87% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.66% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.61% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.61% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.47% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.45% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.35% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.28% Class_I/LTR/Ty1_copia/Tork:Ty1-PROT
0.26% Class_I/LTR/Ty1_copia/Ale:Ty1-GAG
0.26% Class_I/LTR/Ty1_copia/Ale:Ty1-PROT
0.24% organelle/mitochondria
0.19% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-INT
0.16% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.16% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.16% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
0.12% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.09% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.09% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
0.07% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-GAG
0.05% Class_I/LTR/Ty1_copia/Alesia:Ty1-GAG
0.05% Class_I/LTR/Ty1_copia/Ty1-outgroup:Ty1-PROT
0.05% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.02% Class_I/LTR/Ty1_copia/Osser:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/TAR:Ty1-PROT
0.02% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.02% Class_I/LTR/Ty1_copia/Alesia:Ty1-RH
0.02% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.02% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
220 220 0.069 0.069 4212 1.95e-22 seqclust/clustering/clusters/dir_CL0220/CL220_tmb.png N/A 9.50e-04 0.690 4212 61900 0.26% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
221 221 0.068 0.068 4139 1.14e-08 seqclust/clustering/clusters/dir_CL0221/CL221_tmb.png N/A 3.59e-01 0.796 4127 25000 5.24% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.82% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.10% Class_II/Subclass_2/Helitron:Helitron-HEL2
0.10% Class_II/Subclass_2/Helitron:Helitron-HEL1
0.02% organelle/plastid
222 222 0.067 0.067 4061 8.23e-19 seqclust/clustering/clusters/dir_CL0222/CL222_tmb.png N/A 5.96e-02 0.696 4061 95100 0.02% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
223 223 0.066 0.066 3973 1.10e-21 seqclust/clustering/clusters/dir_CL0223/CL223_tmb.png N/A 9.31e-03 0.718 3973 72300 1.06% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
0.73% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.10% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
0.08% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
224 224 0.064 0.064 3911 1.97e-24 seqclust/clustering/clusters/dir_CL0224/CL224_tmb.png N/A 2.59e-04 0.917 3860 63700 99.97% organelle/plastid
225 225 0.064 0.064 3898 2.16e-23 seqclust/clustering/clusters/dir_CL0225/CL225_tmb.png N/A 2.57e-04 0.815 3898 29900 18.21% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
12.13% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
7.47% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
5.80% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
2.69% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
1.56% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
0.31% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.10% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.03% organelle/mitochondria
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
226 226 0.063 0.063 3830 2.16e-23 seqclust/clustering/clusters/dir_CL0226/CL226_tmb.png N/A 7.83e-04 0.807 3830 68900 7.44% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
5.22% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RH
5.12% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
3.94% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
3.26% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-PROT
2.30% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
2.17% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
1.75% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
1.25% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
0.91% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
0.84% organelle/mitochondria
0.57% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.16% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.16% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.10% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.10% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.05% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
227 227 0.062 0.062 3759 9.81e-23 seqclust/clustering/clusters/dir_CL0227/CL227_tmb.png N/A 1.33e-03 0.725 3759 36900 10.83% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
6.41% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-PROT
1.41% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
228 228 0.062 0.062 3738 8.20e-20 seqclust/clustering/clusters/dir_CL0228/CL228_tmb.png N/A 5.43e-02 0.778 3738 311000 10.14% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-PROT
229 229 0.061 0.061 3681 2.61e-21 seqclust/clustering/clusters/dir_CL0229/CL229_tmb.png N/A 2.72e-04 0.504 3681 20900 0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
230 230 0.061 0.061 3673 4.37e-03 seqclust/clustering/clusters/dir_CL0230/CL230_tmb.png N/A 6.62e-01 0.844 3673 72700 0.03% organelle/plastid
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
231 231 0.060 0.060 3647 5.62e-21 seqclust/clustering/clusters/dir_CL0231/CL231_tmb.png N/A 3.15e-02 0.816 3647 52900 7.73% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
6.31% Class_I/LTR/Ty1_copia/SIRE:Ty1-INT
4.91% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
1.89% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
1.45% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.82% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.66% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.33% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.22% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.05% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Bryco:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-INT
232 232 0.059 0.059 3564 4.29e-22 seqclust/clustering/clusters/dir_CL0232/CL232_tmb.png N/A 1.96e-03 0.642 3564 36200
234 234 0.056 0.056 3420 3.91e-19 seqclust/clustering/clusters/dir_CL0234/CL234_tmb.png N/A 7.25e-02 0.829 3420 44200 0.03% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.03% organelle/plastid
235 235 0.056 0.056 3387 3.91e-21 seqclust/clustering/clusters/dir_CL0235/CL235_tmb.png N/A 2.95e-04 0.458 3387 25100 0.03% organelle/plastid
236 236 0.056 0.056 3375 1.23e-24 seqclust/clustering/clusters/dir_CL0236/CL236_tmb.png N/A 2.96e-04 0.941 3375 64400 100.00% organelle/plastid
237 237 0.054 0.054 3256 2.29e-22 seqclust/clustering/clusters/dir_CL0237/CL237_tmb.png N/A 3.07e-04 0.677 3256 13300 21.25% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.25% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
239 239 0.053 0.053 3216 1.75e-21 seqclust/clustering/clusters/dir_CL0239/CL239_tmb.png N/A 1.34e-02 0.682 3216 15000 6.87% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
3.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-PROT
240 240 0.051 0.051 3103 7.79e-18 seqclust/clustering/clusters/dir_CL0240/CL240_tmb.png N/A 1.08e-01 0.905 3103 26900
241 241 0.051 0.051 3088 1.95e-22 seqclust/clustering/clusters/dir_CL0241/CL241_tmb.png N/A 9.72e-04 0.695 3088 21400 12.99% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
9.16% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
8.32% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
2.59% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
2.43% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
2.27% organelle/mitochondria
1.07% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.52% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-INT
0.26% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
0.23% Class_I/LTR/Ty1_copia/TAR:Ty1-INT
0.16% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.06% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.03% Class_I/LTR/Ty1_copia/SIRE:Ty1-GAG
0.03% Class_I/LTR/Ty1_copia/Alesia:Ty1-INT
0.03% Class_I/LTR/Ty1_copia/Tork:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.03% Class_I/LTR/Ty1_copia/Angela:Ty1-INT
242 242 0.051 0.051 3073 1.66e-21 seqclust/clustering/clusters/dir_CL0242/CL242_tmb.png N/A 9.76e-04 0.541 3073 17800
243 243 0.050 0.050 3014 6.67e-16 seqclust/clustering/clusters/dir_CL0243/CL243_tmb.png N/A 9.49e-02 0.438 3014 24300 0.10% Class_I/LINE:LINE-RT
0.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
244 244 0.050 0.050 3004 6.12e-24 seqclust/clustering/clusters/dir_CL0244/CL244_tmb.png N/A 3.33e-04 0.867 3004 132000 92.38% 45S_rDNA/25S_rDNA
245 245 0.049 0.049 2947 5.57e-21 seqclust/clustering/clusters/dir_CL0245/CL245_tmb.png N/A 4.41e-03 0.424 2947 195000 0.14% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.03% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
0.03% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
246 246 0.048 0.048 2901 3.93e-24 seqclust/clustering/clusters/dir_CL0246/CL246_tmb.png N/A 3.45e-04 0.895 2901 51900 99.90% organelle/plastid
247 247 0.048 0.048 2886 2.90e-21 seqclust/clustering/clusters/dir_CL0247/CL247_tmb.png N/A 4.85e-03 0.494 2886 13200 1.91% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-GAG
0.38% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
0.17% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-PROT
0.14% Class_I/LTR/Ty1_copia/SIRE:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/Ikeros:Ty1-PROT
0.03% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-GAG
248 248 0.047 0.047 2872 6.84e-23 seqclust/clustering/clusters/dir_CL0248/CL248_tmb.png N/A 1.39e-03 0.747 2872 57400
249 249 0.047 0.047 2847 1.39e-22 seqclust/clustering/clusters/dir_CL0249/CL249_tmb.png N/A 3.51e-04 0.708 2847 25500 0.07% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.07% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
250 250 0.047 0.047 2825 9.96e-18 seqclust/clustering/clusters/dir_CL0250/CL250_tmb.png N/A 1.04e-01 0.804 2825 57600 0.35% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
251 251 0.046 0.046 2786 3.90e-23 seqclust/clustering/clusters/dir_CL0251/CL251_tmb.png N/A 3.59e-04 0.780 2786 23400 10.80% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
7.43% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RT
4.52% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-PROT
3.63% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
2.80% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RH
1.62% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
1.15% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-CHDII
1.04% organelle/mitochondria
0.93% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
0.61% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
0.54% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-RT
0.54% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
0.50% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-INT
0.43% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-CHDII
0.43% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
0.25% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
0.22% Class_I/LTR/Ty3_gypsy/chromovirus/Chlamyvir:Ty3-INT
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RH
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
252 252 0.045 0.045 2710 2.70e-22 seqclust/clustering/clusters/dir_CL0252/CL252_tmb.png N/A 1.48e-03 0.669 2710 115000 0.52% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-GAG
253 253 0.044 0.044 2644 9.11e-07 seqclust/clustering/clusters/dir_CL0253/CL253_tmb.png N/A 4.09e-01 0.559 2496 34800 3.33% organelle/mitochondria
0.11% organelle/plastid
254 254 0.043 0.043 2623 3.28e-22 seqclust/clustering/clusters/dir_CL0254/CL254_tmb.png N/A 1.22e-02 0.814 2623 40700 27.03% Class_II/Subclass_1/TIR/hAT:hAT-TPase
255 255 0.043 0.043 2620 2.61e-21 seqclust/clustering/clusters/dir_CL0255/CL255_tmb.png N/A 3.82e-04 0.500 2620 7140 0.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.11% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-INT
256 256 0.042 0.042 2559 9.40e-20 seqclust/clustering/clusters/dir_CL0256/CL256_tmb.png N/A 3.83e-02 0.688 2559 16800 0.23% Class_II/Subclass_2/Helitron:Helitron-HEL2
0.16% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-INT
0.04% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
258 258 0.040 0.040 2415 6.53e-21 seqclust/clustering/clusters/dir_CL0258/CL258_tmb.png N/A 4.14e-04 0.398 2415 6700
259 259 0.040 0.040 2404 1.39e-22 seqclust/clustering/clusters/dir_CL0259/CL259_tmb.png N/A 4.16e-04 0.706 2404 13300 5.53% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
260 260 0.040 0.040 2396 1.17e-22 seqclust/clustering/clusters/dir_CL0260/CL260_tmb.png N/A 1.25e-03 0.721 2396 21700 0.67% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-CHDII
261 261 0.038 0.038 2328 1.97e-24 seqclust/clustering/clusters/dir_CL0261/CL261_tmb.png N/A 4.30e-04 0.919 2328 44400 100.00% organelle/plastid
262 262 0.037 0.037 2252 2.49e-24 seqclust/clustering/clusters/dir_CL0262/CL262_tmb.png N/A 4.44e-04 0.908 2252 43100 100.00% organelle/plastid
263 263 0.037 0.037 2240 6.53e-21 seqclust/clustering/clusters/dir_CL0263/CL263_tmb.png N/A 4.46e-04 0.396 2240 5610
264 264 0.037 0.037 2237 8.30e-16 seqclust/clustering/clusters/dir_CL0264/CL264_tmb.png N/A 1.34e-01 0.666 2237 8980
265 265 0.037 0.037 2232 2.64e-23 seqclust/clustering/clusters/dir_CL0265/CL265_tmb.png N/A 4.48e-04 0.803 2232 16800 12.63% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
10.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
3.63% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
2.87% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
2.24% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
1.08% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.54% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-RT
0.36% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.31% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.22% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.13% organelle/mitochondria
0.13% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
0.09% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.09% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-RT
0.04% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RH
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.04% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatI:Ty3-RT
266 266 0.037 0.037 2227 1.12e-20 seqclust/clustering/clusters/dir_CL0266/CL266_tmb.png N/A 1.57e-02 0.720 2227 7920 2.87% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-INT
1.35% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
267 267 0.037 0.037 2215 2.61e-21 seqclust/clustering/clusters/dir_CL0267/CL267_tmb.png N/A 4.51e-04 0.497 2215 16300 4.02% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-GAG
268 268 0.036 0.036 2174 2.28e-18 seqclust/clustering/clusters/dir_CL0268/CL268_tmb.png N/A 5.75e-02 0.625 2174 8800 0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/Phygy:Ty3-RT
269 269 0.034 0.034 2056 4.71e-23 seqclust/clustering/clusters/dir_CL0269/CL269_tmb.png N/A 4.86e-04 0.774 2056 11700 15.32% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-INT
11.82% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RT
6.76% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-aRH
5.69% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-RH
3.89% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
1.02% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-INT
0.44% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-INT
0.34% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.34% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-aRH
0.19% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.19% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-INT
0.15% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.10% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-RH
270 270 0.033 0.033 2005 5.58e-23 seqclust/clustering/clusters/dir_CL0270/CL270_tmb.png N/A 8.98e-03 0.924 2005 32100 99.20% organelle/plastid
271 271 0.032 0.032 1945 2.16e-23 seqclust/clustering/clusters/dir_CL0271/CL271_tmb.png N/A 5.14e-04 0.814 1945 21400 13.26% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
11.47% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
8.74% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
4.73% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
3.19% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
1.49% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
1.39% Class_I/LTR/Ty1_copia/TAR:Ty1-RT
1.29% organelle/mitochondria
0.31% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RT
0.26% Class_I/LTR/Ty1_copia/Ikeros:Ty1-RT
0.21% Class_I/LTR/Ty1_copia/Bryco:Ty1-RT
0.15% Class_I/LTR/Ty1_copia/Gymco-I:Ty1-RT
0.10% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.10% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.05% Class_I/LTR/Ty1_copia/Angela:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
272 272 0.032 0.032 1937 3.91e-21 seqclust/clustering/clusters/dir_CL0272/CL272_tmb.png N/A 1.55e-03 0.455 1937 14500
273 273 0.032 0.032 1923 7.56e-21 seqclust/clustering/clusters/dir_CL0273/CL273_tmb.png N/A 1.56e-03 0.383 1923 26200 0.16% Class_II/Subclass_2/Helitron:Helitron-HEL2
274 274 0.031 0.031 1892 3.06e-05 seqclust/clustering/clusters/dir_CL0274/CL274_tmb.png N/A 5.16e-01 0.844 1892 22400 1.00% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
0.05% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
275 275 0.031 0.031 1862 6.12e-24 seqclust/clustering/clusters/dir_CL0275/CL275_tmb.png N/A 5.37e-04 0.873 1862 25800 98.82% organelle/plastid
1.13% organelle/mitochondria
276 276 0.031 0.031 1851 1.06e-20 seqclust/clustering/clusters/dir_CL0276/CL276_tmb.png N/A 5.40e-03 0.413 1851 61200 0.11% Class_I/LTR/Ty3_gypsy/chromovirus/CRM:Ty3-RT
0.05% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
277 277 0.030 0.030 1848 7.21e-21 seqclust/clustering/clusters/dir_CL0277/CL277_tmb.png N/A 2.16e-02 0.753 1848 16100
278 278 0.029 0.029 1741 8.21e-23 seqclust/clustering/clusters/dir_CL0278/CL278_tmb.png N/A 5.74e-04 0.738 1741 10500
279 279 0.028 0.028 1712 1.14e-21 seqclust/clustering/clusters/dir_CL0279/CL279_tmb.png N/A 5.84e-04 0.568 1712 9510 11.80% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-aRH
0.58% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-aRH
0.18% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-INT
280 280 0.027 0.027 1665 4.98e-22 seqclust/clustering/clusters/dir_CL0280/CL280_tmb.png N/A 6.01e-04 0.632 1665 5940
281 281 0.027 0.027 1637 1.76e-23 seqclust/clustering/clusters/dir_CL0281/CL281_tmb.png N/A 1.83e-03 0.823 1637 36000 0.98% Class_I/LINE:LINE-ENDO
282 282 0.026 0.026 1567 1.21e-19 seqclust/clustering/clusters/dir_CL0282/CL282_tmb.png N/A 3.64e-02 0.672 1567 15200
283 283 0.024 0.024 1445 9.81e-23 seqclust/clustering/clusters/dir_CL0283/CL283_tmb.png N/A 2.08e-03 0.733 1445 9900 24.64% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-INT
17.85% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RT
12.66% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-RH
4.57% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-PROT
4.50% organelle/mitochondria
2.56% Class_I/LTR/Ty3_gypsy/chromovirus/Galadriel:Ty3-CHDII
0.14% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-INT
0.07% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-RH
0.07% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-RH
284 284 0.023 0.023 1411 7.64e-22 seqclust/clustering/clusters/dir_CL0284/CL284_tmb.png N/A 7.09e-04 0.603 1411 5450 15.66% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIII:Ty3-GAG
285 285 0.023 0.023 1389 1.95e-22 seqclust/clustering/clusters/dir_CL0285/CL285_tmb.png N/A 2.16e-03 0.688 1389 12000 0.07% organelle/plastid
286 286 0.023 0.023 1387 1.09e-20 seqclust/clustering/clusters/dir_CL0286/CL286_tmb.png N/A 7.21e-04 0.316 1387 3170
287 287 0.023 0.023 1375 2.34e-04 seqclust/clustering/clusters/dir_CL0287/CL287_tmb.png N/A 5.69e-01 0.790 787 21900
288 288 0.021 0.021 1297 4.29e-21 seqclust/clustering/clusters/dir_CL0288/CL288_tmb.png N/A 7.71e-04 0.452 1297 4990 4.55% Class_I/LTR/Ty3_gypsy/chromovirus/chromo-unclass:Ty3-CHDII
0.69% Class_I/LTR/Ty3_gypsy/chromovirus/Reina:Ty3-CHDII
289 289 0.021 0.021 1288 9.81e-23 seqclust/clustering/clusters/dir_CL0289/CL289_tmb.png N/A 7.76e-04 0.734 1288 6660 0.08% Class_I/LTR/Ty3_gypsy/chromovirus/Tekay:Ty3-RT
290 290 0.020 0.020 1223 2.16e-23 seqclust/clustering/clusters/dir_CL0290/CL290_tmb.png N/A 8.18e-04 0.809 1223 10100 18.48% Class_II/Subclass_1/TIR/hAT:hAT-TPase
291 291 0.020 0.020 1204 7.41e-15 seqclust/clustering/clusters/dir_CL0291/CL291_tmb.png N/A 1.35e-01 0.542 1204 8720
292 292 0.020 0.020 1195 5.57e-21 seqclust/clustering/clusters/dir_CL0292/CL292_tmb.png N/A 8.37e-04 0.416 1195 2820 24.44% Class_I/LINE:LINE-RH
293 293 0.019 0.019 1180 3.69e-22 seqclust/clustering/clusters/dir_CL0293/CL293_tmb.png N/A 8.47e-04 0.646 1180 4720
294 294 0.018 0.018 1110 5.53e-21 seqclust/clustering/clusters/dir_CL0294/CL294_tmb.png N/A 6.31e-03 0.552 1110 16200
295 295 0.017 0.017 1044 2.09e-21 seqclust/clustering/clusters/dir_CL0295/CL295_tmb.png N/A 9.58e-04 0.520 1044 5260
296 296 0.017 0.017 1024 6.55e-21 seqclust/clustering/clusters/dir_CL0296/CL296_tmb.png N/A 2.54e-02 0.806 1024 7200
297 297 0.017 0.017 1023 5.76e-22 seqclust/clustering/clusters/dir_CL0297/CL297_tmb.png N/A 9.78e-04 0.624 1023 5860
298 298 0.016 0.016 989 1.58e-14 seqclust/clustering/clusters/dir_CL0298/CL298_tmb.png N/A 1.76e-01 0.782 985 5350 0.20% organelle/plastid
299 299 0.016 0.016 986 2.83e-22 seqclust/clustering/clusters/dir_CL0299/CL299_tmb.png N/A 5.08e-03 0.819 984 18300
300 300 0.016 0.016 983 1.88e-15 seqclust/clustering/clusters/dir_CL0300/CL300_tmb.png N/A 1.43e-01 0.669 983 3900
301 301 0.016 0.016 960 4.29e-22 seqclust/clustering/clusters/dir_CL0301/CL301_tmb.png N/A 1.04e-03 0.641 960 3920
302 302 0.016 0.016 956 2.64e-21 seqclust/clustering/clusters/dir_CL0302/CL302_tmb.png N/A 6.28e-03 0.637 956 19400
303 303 0.015 0.015 905 5.21e-19 seqclust/clustering/clusters/dir_CL0303/CL303_tmb.png N/A 5.41e-02 0.639 905 3240 0.33% organelle/mitochondria
304 304 0.015 0.015 892 1.17e-23 seqclust/clustering/clusters/dir_CL0304/CL304_tmb.png N/A 1.12e-03 0.835 892 6720
305 305 0.015 0.015 890 1.44e-23 seqclust/clustering/clusters/dir_CL0305/CL305_tmb.png N/A 1.12e-03 0.828 890 5110 13.60% Class_I/LTR/Ty1_copia/Ivana:Ty1-RT
11.80% Class_I/LTR/Ty1_copia/Ivana:Ty1-INT
6.40% Class_I/LTR/Ty1_copia/Ivana:Ty1-RH
4.72% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
3.03% Class_I/LTR/Ty1_copia/Ale:Ty1-RT
2.13% Class_I/LTR/Ty1_copia/Ivana:Ty1-PROT
1.69% organelle/mitochondria
1.46% Class_I/LTR/Ty1_copia/SIRE:Ty1-RH
0.79% Class_I/LTR/Ty1_copia/SIRE:Ty1-RT
0.34% Class_I/LTR/Ty1_copia/Ale:Ty1-RH
0.22% Class_I/LTR/Ty1_copia/Alesia:Ty1-RT
0.22% Class_I/LTR/Ty1_copia/Tork:Ty1-RT
0.11% Class_I/LTR/Ty1_copia/Alesia:Ty1-PROT
0.11% Class_I/LTR/Ty1_copia/Ale:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/Tork:Ty1-INT
0.11% Class_I/LTR/Ty1_copia/Gymco-II:Ty1-RH
306 306 0.014 0.014 870 4.29e-21 seqclust/clustering/clusters/dir_CL0306/CL306_tmb.png N/A 1.15e-03 0.452 870 2730 18.28% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-GAG
9.31% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.34% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
0.34% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-GAG
307 307 0.014 0.014 867 8.75e-22 seqclust/clustering/clusters/dir_CL0307/CL307_tmb.png N/A 1.15e-03 0.588 867 4130
308 308 0.014 0.014 857 2.29e-22 seqclust/clustering/clusters/dir_CL0308/CL308_tmb.png N/A 1.17e-03 0.677 857 3270
309 309 0.014 0.014 857 1.76e-23 seqclust/clustering/clusters/dir_CL0309/CL309_tmb.png N/A 1.17e-03 0.820 857 5360 0.35% Class_II/Subclass_1/TIR/hAT:hAT-TPase
310 310 0.014 0.014 853 3.93e-24 seqclust/clustering/clusters/dir_CL0310/CL310_tmb.png N/A 1.17e-03 0.887 853 15200 99.41% organelle/plastid
311 311 0.014 0.014 822 9.40e-20 seqclust/clustering/clusters/dir_CL0311/CL311_tmb.png N/A 4.26e-02 0.691 822 3340
313 313 0.013 0.013 764 2.34e-21 seqclust/clustering/clusters/dir_CL0313/CL313_tmb.png N/A 1.31e-03 0.513 764 11000
314 314 0.012 0.012 754 3.21e-21 seqclust/clustering/clusters/dir_CL0314/CL314_tmb.png N/A 1.33e-03 0.484 754 3420
315 315 0.012 0.012 749 1.48e-20 seqclust/clustering/clusters/dir_CL0315/CL315_tmb.png N/A 2.27e-02 0.702 749 8690
316 316 0.012 0.012 719 2.16e-21 seqclust/clustering/clusters/dir_CL0316/CL316_tmb.png N/A 1.25e-02 0.661 719 2780
317 317 0.012 0.012 704 5.69e-23 seqclust/clustering/clusters/dir_CL0317/CL317_tmb.png N/A 1.42e-03 0.764 704 3360
318 318 0.012 0.012 701 1.17e-20 seqclust/clustering/clusters/dir_CL0318/CL318_tmb.png N/A 7.13e-03 0.310 701 9430
319 319 0.011 0.011 689 3.55e-21 seqclust/clustering/clusters/dir_CL0319/CL319_tmb.png N/A 1.45e-03 0.472 689 1920 19.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatII:Ty3-PROT
0.15% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatIV_Ogre:Ty3-PROT
320 320 0.011 0.011 681 3.17e-03 seqclust/clustering/clusters/dir_CL0320/CL320_tmb.png N/A 6.51e-01 0.806 681 9970
321 321 0.011 0.011 675 1.07e-19 seqclust/clustering/clusters/dir_CL0321/CL321_tmb.png N/A 4.00e-02 0.679 675 2420
322 322 0.011 0.011 665 4.29e-22 seqclust/clustering/clusters/dir_CL0322/CL322_tmb.png N/A 1.50e-03 0.642 665 3200 9.32% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
323 323 0.011 0.011 662 3.16e-22 seqclust/clustering/clusters/dir_CL0323/CL323_tmb.png N/A 1.51e-03 0.655 662 4070 16.47% Class_II/Subclass_1/TIR/EnSpm_CACTA:CACTA-TPase
324 324 0.011 0.011 659 8.09e-21 seqclust/clustering/clusters/dir_CL0324/CL324_tmb.png N/A 1.52e-03 0.373 659 1780 5.01% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Ogre_Tat/TatV:Ty3-GAG
0.15% Class_I/LTR/Ty3_gypsy/non-chromovirus/OTA/Athila:Ty3-GAG
325 325 0.011 0.011 655 1.17e-22 seqclust/clustering/clusters/dir_CL0325/CL325_tmb.png N/A 1.53e-03 0.724 655 2770
326 326 0.010 0.010 626 3.55e-21 seqclust/clustering/clusters/dir_CL0326/CL326_tmb.png N/A 1.60e-03 0.473 626 1780
327 327 0.010 0.010 621 2.09e-21 seqclust/clustering/clusters/dir_CL0327/CL327_tmb.png N/A 1.61e-03 0.522 621 2260 0.32% Class_I/LTR/Ty1_copia/Ivana:Ty1-GAG
328 328 0.010 0.010 615 3.91e-21 seqclust/clustering/clusters/dir_CL0328/CL328_tmb.png N/A 1.63e-03 0.461 615 3980