Workshop training materials and tools

Day 1

TideCluster, DANTE, DANTE_LTR, DANTE_TIR

• Practical Training Day 1

Day 2

• Practical Training Day 2

Tools introduced during workshop:

• TideCluster
• DANTE
• DANTE_LTR
• DANTE_TIR
• REPET
• RepetDB (User Guide)
• TEtrimmer
• soloLTRseeker

Data:

• config.yaml
• RM_custom_library.fasta
• Tandem_repeat_library.fasta
• tiny_pea.fasta

Repeat Annotation Pipeline singularity image:

• Singularity Image